Gene Pars_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2220 
Symbol 
ID5054966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1990151 
End bp1990657 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID640469773 
Productphosphodiesterase 
Protein accessionYP_001154418 
Protein GI145592416 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0660952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGTGG TTGCCATTTC AGACAGCCAT GACAACGTCA TAGCTATTAG GCGGGTTGGT 
GAGGAGGCGA GGCGCAGGGG GGTTAAGCTG ATCCTGCATG CCGGAGACTG GGTGTCGCCA
TTTGCCGCTA GGTTTTTAAG GGAGGCGGTG GGCGAGGGGG TAAGGATAGT TGGCGTATGG
GGCAACAACG AGGGGGAGAG ACCCTATTTT CTAGAAACGG CGCGGAAATA CGGCGTTGAA
ATCGCTGGCG ACGCCGCGGA GCTGGAGGTC AGCGGCAGGA AAATAGCGGT GTACCACGGC
ACATCGCCCG TGTTGCTGAG GGCGTTGGCT GAGTCCGACC TCTACGACGT GGTGATCTAC
GGCCACACCC ACCAAGCCTC GCTGGAGAGG AGGGGGAGGA CGCTGGTGGT GAACCCCGGG
GAGCTGTGCG GTTGCCTAAC CGGCAGGTCG AGCTACGCCC TTATAGACTT GGCGAAGCTG
GAGGCCGATT TGGTATTTCT CACGTGA
 
Protein sequence
MLVVAISDSH DNVIAIRRVG EEARRRGVKL ILHAGDWVSP FAARFLREAV GEGVRIVGVW 
GNNEGERPYF LETARKYGVE IAGDAAELEV SGRKIAVYHG TSPVLLRALA ESDLYDVVIY
GHTHQASLER RGRTLVVNPG ELCGCLTGRS SYALIDLAKL EADLVFLT