Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2220 |
Symbol | |
ID | 5054966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1990151 |
End bp | 1990657 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640469773 |
Product | phosphodiesterase |
Protein accession | YP_001154418 |
Protein GI | 145592416 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0660952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGTGG TTGCCATTTC AGACAGCCAT GACAACGTCA TAGCTATTAG GCGGGTTGGT GAGGAGGCGA GGCGCAGGGG GGTTAAGCTG ATCCTGCATG CCGGAGACTG GGTGTCGCCA TTTGCCGCTA GGTTTTTAAG GGAGGCGGTG GGCGAGGGGG TAAGGATAGT TGGCGTATGG GGCAACAACG AGGGGGAGAG ACCCTATTTT CTAGAAACGG CGCGGAAATA CGGCGTTGAA ATCGCTGGCG ACGCCGCGGA GCTGGAGGTC AGCGGCAGGA AAATAGCGGT GTACCACGGC ACATCGCCCG TGTTGCTGAG GGCGTTGGCT GAGTCCGACC TCTACGACGT GGTGATCTAC GGCCACACCC ACCAAGCCTC GCTGGAGAGG AGGGGGAGGA CGCTGGTGGT GAACCCCGGG GAGCTGTGCG GTTGCCTAAC CGGCAGGTCG AGCTACGCCC TTATAGACTT GGCGAAGCTG GAGGCCGATT TGGTATTTCT CACGTGA
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Protein sequence | MLVVAISDSH DNVIAIRRVG EEARRRGVKL ILHAGDWVSP FAARFLREAV GEGVRIVGVW GNNEGERPYF LETARKYGVE IAGDAAELEV SGRKIAVYHG TSPVLLRALA ESDLYDVVIY GHTHQASLER RGRTLVVNPG ELCGCLTGRS SYALIDLAKL EADLVFLT
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