Gene Pars_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2145 
Symbol 
ID5054909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1921305 
End bp1922564 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content51% 
IMG OID640469697 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001154343 
Protein GI145592341 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAT ACTATACCTA TGTAGATTTT ACATTTCACG AAGTATTAAA AACTCGGAGG 
CTGGCCTACG TCATGGTCGC TTTTTATCCA CATTTTGTAA GCGCCTCTTG TACAAGATGT
GGCAACTGCG TGGAAATCTG CCCCTCGTAC ATGGCGACAG GTGAGATAAA GAATTCGCCT
ATGGGCAGGC TTGAGCTAAT AAGACGTGGC GCCGCTCCCG AGGAATTATT CACAAGTTTT
TCAAAATGTA CAATGTGCAA GAGGTGCGCA TACCGTTGCC CTTTGGGACT TGACGTAGCT
GAGGTGACGC GGATAGTGCG TGAGAGCTTG GCGAGAATAG GATACGCCCA GCCCTACGTA
CAGAAAGTCG TGGGGAACTT CCTAAAAACT GGTAATAACA TAGGGATGAC GCCTAAAGTG
GTAGAAATGG CCATTAGAGT AGCGGTGAGA AGAGCCGAGA AGGAAAAGGG CGATGCGCCT
CGGGTTTTCC TACACATGGA CGGCGCTTAT AGAGAGGCAG TCTCGGGCGC TGAGGAAGCG
CCGCGGCGGA AGTACGCTCT GCTCTTCCCC TCGTCGTCGG ACATTTTCGA ATTTGACGCG
GCCCTGAGGG GGTACATATA TGTACTGCAC AGGTTGGGCT TCGACGTTGT TATTAGTTTA
AAGGTGCCGG ACACCGCAAA CTACGGCTAC TACCTCTCTA CTGAGAGCAT GTACAAAATT
GCCGAAATGT ACCTTGCGGA GATCCGGAAG GTGTCGCCGG CCTTGGTGGT TTTCGGCGAA
TGTGGCCACG GGTGGCACGT ATTCGTAAGC ATAGTAGCTC CTAAGACGTC TACGCCCTCC
TTCCACATAC ACCAACTTAC CTACAGGGCG TACACCCGCG GCGTGTTGAG GCTAGAAAAG
GTGGACGTAG AACGTCCCGT GGTATATATG GATCCATGCA ACTACTCACG CGGCGCATTG
CCTATTGTGA AAGAGCCAAG GGCTTTGCTA AAAGCGATAG TGGGGGACTT CGCCGAGGTG
TGGATCGAGC CAAGAGACTC AATTTGCTGT CTCGGCGGAG GGGGACTTAT CGCGCCTGAA
ATGTTAAACA CCGCTGTGAA GTATTGGCAA AAACTCAGGA AGAGGCTAAG CCTAGGTGCA
AAAACTGTTG TCAGGCCTTG TGCTACGTGT AAGGCGCAGT TAAAAAGAGT GTTCAACGCC
ATGGGCCTCG ATGCCAATGT TACGGGGGTT ATAGAACTTG TATACAAGGC AGTTAGGTAG
 
Protein sequence
MFLYYTYVDF TFHEVLKTRR LAYVMVAFYP HFVSASCTRC GNCVEICPSY MATGEIKNSP 
MGRLELIRRG AAPEELFTSF SKCTMCKRCA YRCPLGLDVA EVTRIVRESL ARIGYAQPYV
QKVVGNFLKT GNNIGMTPKV VEMAIRVAVR RAEKEKGDAP RVFLHMDGAY REAVSGAEEA
PRRKYALLFP SSSDIFEFDA ALRGYIYVLH RLGFDVVISL KVPDTANYGY YLSTESMYKI
AEMYLAEIRK VSPALVVFGE CGHGWHVFVS IVAPKTSTPS FHIHQLTYRA YTRGVLRLEK
VDVERPVVYM DPCNYSRGAL PIVKEPRALL KAIVGDFAEV WIEPRDSICC LGGGGLIAPE
MLNTAVKYWQ KLRKRLSLGA KTVVRPCATC KAQLKRVFNA MGLDANVTGV IELVYKAVR