Gene Pars_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2061 
Symbol 
ID5056138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1843733 
End bp1844203 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID640469610 
Productarchaemetzincin-like protein 
Protein accessionYP_001154259 
Protein GI145592257 
COG category[R] General function prediction only 
COG ID[COG1913] Predicted Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.133496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTA GGCTCACTGT TGTGGCCCCA CCTTCCGTTG AGACGGTGGT GATACCGGAG 
TTCGACGTGG TTTGGCTAGT GAAGGAGCTC GATGCCTCTC GTTACGTAGA TCCCCTGAGG
GGGCAATGCA GAGCAGACGC CGTGGTGAAG GCGCTGTCTC GGAGCGTGAA CACGCCAACG
GTGTTTATAA TGGAGTGCGA CGGCTACTAC CCCGGGCTGA ACTTCGTCTT TGGTCTCGCC
GTGCCGCACC TCAAAACTGC GGTGGTCTTC ACCGCAAGGC TTAGAGGCCC CCAGTTCCGT
GAGAGGCTCG TGAAGGAGAT CACCCACGAG GCGGGCCATC TATACGGCCT TGGCCACTGT
GGCGACCCCA GTTGTGTTAT GTACTTCAGC AATTCCATAT ACGACACGGA TAGGAAGAGC
GCCTTTTTCT GTGAGAGGTG CCGCCGGCGG CTCTACGCCT TTTTCAGGTA G
 
Protein sequence
MRPRLTVVAP PSVETVVIPE FDVVWLVKEL DASRYVDPLR GQCRADAVVK ALSRSVNTPT 
VFIMECDGYY PGLNFVFGLA VPHLKTAVVF TARLRGPQFR ERLVKEITHE AGHLYGLGHC
GDPSCVMYFS NSIYDTDRKS AFFCERCRRR LYAFFR