Gene Pars_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1965 
Symbol 
ID5054572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1762790 
End bp1763482 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content54% 
IMG OID640469512 
ProductSPP-like hydrolase 
Protein accessionYP_001154164 
Protein GI145592162 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0481119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGACT TAGACGGCAC TCTAACGCTG AGTAGGCACA CATACGAGTT ATCTACGGAG 
GCTCTGCTGG CACTACGAAG GGCTAGGGAT GCGGGTCTCA GAGTGGTTCT CGCCACGGCT
AACGGTCTAG ATTTTGCCTT GACAATCGCT AGGTATCTCG GGATTAGAGA TGTCGTTGCT
GAGAATGGTT GCTTGGTGTA CCTAGATGGA ACGACCTACG AGCTATGCTC TGCTGACATG
TCTGCCGTGG ATCAAATTAT TCTCTCCACG GGGGCTGTTA GCCCAAGCCC GCAGAACAAG
TGCAGGAAGT ACGACCTTGC TTATATCCCC CTGGCGGAAG ATGCCGTGGA GAGAATAAGA
GTAGCGGTAG GCCCCTCCTT TGTTGTGGAG TCAAGCGGTT ATGCGATTCA TGTGAGACCT
GCCGGCGTTG ATAAAGGTAC TGCCGTGTTA TGGCTCTGCG AGAAGCTGGG AGTGCCTTGT
TTTCAGATAG CCTCTGTTGG CGACAGCGAC GTGGATGTGG GCATGTTGAA AGTTAGCTGG
GGAATCGCTG TCGGCAACGC TACGCCAGCC GCCAAATCAG CGGCGAAGAT GGTTGTGGAA
GGACCTAGCG GGATCGGCTT TAAGGAGGCT GTAGATATAA TTCTCTCAGG CGGTGGATGC
ACCCCTGATG ACGTAGATAG TGAGAGGGCC TAG
 
Protein sequence
MVDLDGTLTL SRHTYELSTE ALLALRRARD AGLRVVLATA NGLDFALTIA RYLGIRDVVA 
ENGCLVYLDG TTYELCSADM SAVDQIILST GAVSPSPQNK CRKYDLAYIP LAEDAVERIR
VAVGPSFVVE SSGYAIHVRP AGVDKGTAVL WLCEKLGVPC FQIASVGDSD VDVGMLKVSW
GIAVGNATPA AKSAAKMVVE GPSGIGFKEA VDIILSGGGC TPDDVDSERA