Gene Pars_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1948 
Symbol 
ID5054773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1748334 
End bp1748963 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content55% 
IMG OID640469494 
ProductMn2+-dependent serine/threonine protein kinase 
Protein accessionYP_001154147 
Protein GI145592145 
COG category[T] Signal transduction mechanisms 
COG ID[COG3642] Mn2+-dependent serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACTCT TGGCAAAAGG CGCAGAGGCG GAGATATACG TTGTAGACTG GTTTGGGTTG 
CAAGCGGTTT TGAAGTGGAG AAAGCCAAAA GCGTACAGGG ACCCCACTCT TGACTACCAG
ATCAGGAGGA GGAGAACCAT TAATGAAGTG AGGAACATGC ATATGGCTCA TACCCTGGGC
GTGAGGGTTC CTGCTGTCTA CTTCTTCGAC CCTGAGAGGG CGGTGATCTT GATGGAATAC
GTAGAGGGGA AAAACTTGCG TGATCTCCTC AACGCCGGCA GATACCACTA CCTCCGAGCA
GTGGGTGTCT TGGTGGGCAG AATGCATAAG GCGGGGCTTA TACACGGCGA CCTCGCCCCC
ACTAACATAA TACTAGCCGG GGGCGAGCTG TGCTTCATCG ACTTCGGTCT CGGCGAGCAG
AGAAAGGGCT GGGGCAAAAA AGTGGCCGTG CTCTACGCCA GGGATATTAA CGTGTTGTTG
CGAAACCTCG ACTTATACGG AGAAAGGGCC GATTTCTTAA AGTCGCTTTT CTGGGAGGGC
TATAGAGAAG AAATGTCGGA AAAGGCCGCC GTAGTGGAGC GGGAGGTGGC TAGGATAAGG
GCCTCGGGGC GCTACGCGGA GCGGCTCTAG
 
Protein sequence
MQLLAKGAEA EIYVVDWFGL QAVLKWRKPK AYRDPTLDYQ IRRRRTINEV RNMHMAHTLG 
VRVPAVYFFD PERAVILMEY VEGKNLRDLL NAGRYHYLRA VGVLVGRMHK AGLIHGDLAP
TNIILAGGEL CFIDFGLGEQ RKGWGKKVAV LYARDINVLL RNLDLYGERA DFLKSLFWEG
YREEMSEKAA VVEREVARIR ASGRYAERL