Gene Pars_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1886 
Symbol 
ID5055583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1693685 
End bp1694902 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content51% 
IMG OID640469432 
ProductDNA primase 
Protein accessionYP_001154089 
Protein GI145592087 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCTT TGACCATCGT GGCTAAGTAC ATGATAGTCG CGCAGATAGA GGTAAACGGC 
AGTGTTGATA AGTCCGACAT AATAGGGGCG CTATTTTCGC AGACCGAGGG GCTTTTGGGC
AAGGATATGG ATCTAAGAGA GTTGCAAATG ATGGGGCGTA TCGGGAGGAT AGAAGTTGAC
ATATTTGAGA AAAACGGCAA GACGAAGGCC AAGATATACA TTCCAAGTAA CTTAGACAGA
TACGAGACGG CGCTTGTAGC CGCGCTGGTA GAGAGTATAG AGAGGGTTGG CCCCTACCCC
GCCTCTGTAA AAGTAATTGA AATAAGAGAT CTGCGCGAGG AGAAGAGGAA GAAAATAATC
GAGAAGGCCA AAGAACTTGT CAAGTTAATC GAAGAGGAGA TCTTGCCAGA TACCAAGGAA
ATTATCGAGC GGTTGAAGGA AGACGTGGCT AAGGCGGAGG TCGTAGAGTA CGGCCCCGAG
AGGCTCCCGG CAGGGCCCGA CGTGGATAAG TCAGACGCGA TAATAATTGT AGAGGGCAGG
GCCGATGTGG TGAACCTAGT GAAACACGGC TATAGAAACG TCATCGCGCT TGAGGGCATC
AGCAGAGGGG TGCCGCAGAC AATTATTGAC CTAAGTAAGA AGAAGAACGT GACGGTCTTC
ATAGACGGCG ACAAGGGGGG CGAACTTGTG TTGAAGGAGC TGTTGAAAGT GGCCCACGTA
GACTACATAG CTAGGGCCCC GCCCGGCAAG GAGGTGGAAC AGCTCACGGC TAAGGAAATA
GCAAAGGCGC TGAGGAATAA GATCAGCCTA GAGGAGTGGC TGGCCCAGCA GAAGGCGTCT
GGCGAGAGGG CGGAGGCCCC GCCCCAGCCT GCCCAGCAGC CACAGCAGGA GCAGCCGGCG
CCTCAGCGCC CCATTCAAGC CCCCTTCGAC CTAGAGAAGA AGATAGAAGA AATGTTGGGC
ACTTTAGAGG CGGAGATATA CGACCAGAAC TGGACACTTG TAAAGAGACT GCCTGTGAGG
GAGTTACCAG ACTTCCTCGC CACTAGTGGC GATTCTATCT ATGCAATAAT CCTAGACGGC
ATAACAACGC AGAGAATCGT CGACCTAGCA GCTAAGAAGG GTGTCAAGGT AATAATCACT
GCAAGGACTG GTCCTCTCAC AAAAGTCCCA GAAGATATGT CTATATACAC GTTTGAACAA
TTAAAGAAAA CAGAATAG
 
Protein sequence
MGALTIVAKY MIVAQIEVNG SVDKSDIIGA LFSQTEGLLG KDMDLRELQM MGRIGRIEVD 
IFEKNGKTKA KIYIPSNLDR YETALVAALV ESIERVGPYP ASVKVIEIRD LREEKRKKII
EKAKELVKLI EEEILPDTKE IIERLKEDVA KAEVVEYGPE RLPAGPDVDK SDAIIIVEGR
ADVVNLVKHG YRNVIALEGI SRGVPQTIID LSKKKNVTVF IDGDKGGELV LKELLKVAHV
DYIARAPPGK EVEQLTAKEI AKALRNKISL EEWLAQQKAS GERAEAPPQP AQQPQQEQPA
PQRPIQAPFD LEKKIEEMLG TLEAEIYDQN WTLVKRLPVR ELPDFLATSG DSIYAIILDG
ITTQRIVDLA AKKGVKVIIT ARTGPLTKVP EDMSIYTFEQ LKKTE