Gene Pars_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1871 
Symbol 
ID5055765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1674845 
End bp1676131 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content50% 
IMG OID640469417 
ProductGlu/Leu/Phe/Val dehydrogenase, C terminal 
Protein accessionYP_001154074 
Protein GI145592072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.468327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCATA CAAGTGGAGC ATATATTACA AGCGCATTTC TCGAAAATAC CCTATACACC 
CTTAAACGTG GTATAGAGCT CGCCGGACTA CCCGTGGAGT TTTACGAAGC CCTCGCAAGA
CCAAAACGCA TACTAATCGT AAGCATACCG GTAAGGCAAG ACAACGGGAA AATACAATAC
TTCGAGGGTT ATCGTGTTCA GCATTGTGAT GCTTTGGGGC CTTTTAAGGG TGGTATCCGT
TTTCATCCGG AGGTTACTCT TGCTGATGAT ATTGCTCTTG CCATGTTGAT GACGCTTAAG
AATAGCCTCG CCGGCCTCCC ATACGGCGGC GCTAAAGGCG CCGTCCGCGT CGACCCAAAA
AAACTATCGG CAAGAGAGCT TGAAGAGCTC TCCAGAGGCT ACGCCAGAGC CATTGCGCCT
TTAATAGGCG ACGTCGTGGA CATACCAGCC CCAGACGTAG GCACCAACGC CCAGATAATG
GCGTGGATGA CAGACGAATA CTCCAAAATA AAAGGCCACA ACACCCCCGG CGTATTCACC
TCCAAACCAC CAGAACTCTG GGGAAACCCA GTAAGAGAAT ACGCCACCGG CCTCGGAGTA
GCAGTAACCA CAAGAGAAAT GGCCAAAAGA CTCTGGGGAG AAATAGAGGG GAAAACCGTG
GCAGTACAGG GCATGGGTAA TGTTGGTAGG TGGACAGCGT ACTGGATTAG GGAGCTGGGA
GGCAAGGTAG TTGCGGTTAG TGATATAAAT GGCGTGGCGT ACAAGAAGGA TGGGCTTGAT
ACTAGCCTAA TAGCCGAGAA TAAGTCTCTG AGCGGCCCCT CTCTAGTTGA GATGTTTGTA
TCAAAGAATG GCGCAGAGTA CATCAAAAAC CCAGACGCAA TATTCAGTAT AGACGTTGAT
GTTCTTATTC CTGCTGCTAT TGAGAATGTG ATTCGGGGGG ATAATGTCGG TTTGGTTAAG
GCTAGGCTGG TGGTGGAGGG TGCTAATGGG CCTACTACTC CGGAGGCTGA GAGGGAGCTT
TACAAGAGGG GTGTGGTGGT GGTGCCCGAC ATCTTGGCCA ACGCCGGCGG CGTCGTCATG
TCGTACTTGG AGTGGGTGGA AAACCTCCAG TGGTATTTCT GGGATGAGGA GGAGACTAGA
AAAAGACTAG AAGCCATAAT GGTAAACAAC GTGGCGAAGG TATACAACCG GTGGCAAAAA
GAAAAAGAAT GGACCATGAG AGACGCCGCC ATAGTCACAG CCCTAGAAAG AATATACAAA
GCAATGAAAA CAAGAGGATG GATCTAA
 
Protein sequence
MAHTSGAYIT SAFLENTLYT LKRGIELAGL PVEFYEALAR PKRILIVSIP VRQDNGKIQY 
FEGYRVQHCD ALGPFKGGIR FHPEVTLADD IALAMLMTLK NSLAGLPYGG AKGAVRVDPK
KLSARELEEL SRGYARAIAP LIGDVVDIPA PDVGTNAQIM AWMTDEYSKI KGHNTPGVFT
SKPPELWGNP VREYATGLGV AVTTREMAKR LWGEIEGKTV AVQGMGNVGR WTAYWIRELG
GKVVAVSDIN GVAYKKDGLD TSLIAENKSL SGPSLVEMFV SKNGAEYIKN PDAIFSIDVD
VLIPAAIENV IRGDNVGLVK ARLVVEGANG PTTPEAEREL YKRGVVVVPD ILANAGGVVM
SYLEWVENLQ WYFWDEEETR KRLEAIMVNN VAKVYNRWQK EKEWTMRDAA IVTALERIYK
AMKTRGWI