Gene Pars_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1831 
Symbol 
ID5056215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1640796 
End bp1641248 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content45% 
IMG OID640469377 
Producthypothetical protein 
Protein accessionYP_001154034 
Protein GI145592032 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000057693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0919322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACG TGGCGTGTGT CAAGCCTGCT GATTACAAAT ATGGAGAGCA CACCGCAGAC 
GTCCTTATAG AGGCGTACGG CTGCACTCTG GAAGAGGCGT TTAGAAACGC GGCTATTGCC
TATGCAGATC TGACATACTA TACTGAGAGA GTTGAGCCTA GGCTTGTAAA GAGCCTCGAT
ATCGAGTACG ACGACTTAGA AGGCTTATTG TTTAAGTGGA TTGACGAGTT ACTCTACCTA
TTTGATGCCG AGAAATTTGC CATAAGCCGC AAGATTGAGG TGATGATAGA ACAGGACGGC
GGATATAGAC TGAGGGCAAT AATATATGGC GAAACTTACG ACATAAATAA ACATGGCTTC
ACAGGTCTCA TAGTCAAGGC CATGACATTT CATATGTTAG AAATTGCAAA AGTCGGCGAT
TACTGGAAGT TGCAGTTTGT AGTGGACATA TGA
 
Protein sequence
MGNVACVKPA DYKYGEHTAD VLIEAYGCTL EEAFRNAAIA YADLTYYTER VEPRLVKSLD 
IEYDDLEGLL FKWIDELLYL FDAEKFAISR KIEVMIEQDG GYRLRAIIYG ETYDINKHGF
TGLIVKAMTF HMLEIAKVGD YWKLQFVVDI