Gene Pars_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1783 
Symbol 
ID5055564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1605206 
End bp1606003 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content48% 
IMG OID640469328 
Producttranslation initiation factor IF-2 subunit alpha 
Protein accessionYP_001153986 
Protein GI145591984 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1093] Translation initiation factor 2, alpha subunit (eIF-2alpha) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.030089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTTGG TAAAGAAGGA CTTTCCTGAT GTGGGAGAGC TGGTTATTGG CACTGTGAAG 
AAACTAGCTG AGCACGGCGC CTACGTGTAC CTCGATGAGT ACGACCTCGA GGCTTTTGCT
CCAACGCAGG AGATAATCCA GTCTTGGTTC CACTCTATAA GAGATTACGT AAAGGAGGGC
AACAAGACGG TCTTTAAGGT TATTAGCGTA AATCCCCGGA TGAGAGTTGT TGAGGTGTCT
CTTAAGCGTG TGAGAGTAGA CGAGAAGGAG AAGAAGCTTC TCCTGTACCG CCACAGGGTG
AGGACACTGA AACTTTTAGA AATAGCGGTA AAGAGGCTTA ACAAGCCTCC AGAGGAGGCA
TTGAAGGTGT TGTGGTATCT GGAGGAGCAG TTCGGAGACC CCTTCAAGGT GTTTGAAGAC
GTGGTAAAGA TTGGGCCCCA CGTGCTAGAC GACCTCGAGC TAGACCCCAA GCTAAAGGAG
GCAATAATCG AGCTGGCAAC TCAACAAATT ACACTACCGC CTACCAAAAT TTCCGGGATT
ATAAAAGCCG TAAGCGTCGA CGGGGATGGC GTAGAGAAAA TAAAAGCCGC CCTGGAAGAG
CTGGCGAAGA CATTGCAAGA GAAATATCCA CAAGTATCTA CCAAAATATA CGTTATAGGC
CCCCCTCGGT ATAGAATAGA CATGGTTGGC CAGGCGCCGA AGCAGGTGGA GTCGGCCTTT
ACAGAAGTTG GAAATATGCT ACAGACATTG CAGAAGAAAT ATAAAATCAT CGCGACGATA
CAGCGACTTG AACAATGA
 
Protein sequence
MKLVKKDFPD VGELVIGTVK KLAEHGAYVY LDEYDLEAFA PTQEIIQSWF HSIRDYVKEG 
NKTVFKVISV NPRMRVVEVS LKRVRVDEKE KKLLLYRHRV RTLKLLEIAV KRLNKPPEEA
LKVLWYLEEQ FGDPFKVFED VVKIGPHVLD DLELDPKLKE AIIELATQQI TLPPTKISGI
IKAVSVDGDG VEKIKAALEE LAKTLQEKYP QVSTKIYVIG PPRYRIDMVG QAPKQVESAF
TEVGNMLQTL QKKYKIIATI QRLEQ