Gene Pars_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1727 
Symbol 
ID5054776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1555606 
End bp1555920 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content52% 
IMG OID640469270 
Producthypothetical protein 
Protein accessionYP_001153930 
Protein GI145591928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.108372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000272238 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTGTGAAC TATATTGGCG CCTGTATGAA CAGGATATTC CTGTGCTAAC AGGCCCCTCT 
CCGCTTGCTA GAGTGCTTGG TTGCCCAGCG CCCTGCGACT GCGACGTGGT GGTGTATGTG
GGAGATCGCG AGCGAGTAGG CAGAAATGAC TGCGTCTGGG CTTCGTCAGA TCCAACCTTT
ATACACAGAC CAATATGGAT AGGCGGTTAC CCCCACGTGG CGCCTGAGGA TTTGAAAAAC
ATAATCTCGC CGGAGGTCTC GTCCACTGTT GAATGCATTA TGAAAAAACT TAGAGGTGAA
GTTCGTGCAC CTTGA
 
Protein sequence
MCELYWRLYE QDIPVLTGPS PLARVLGCPA PCDCDVVVYV GDRERVGRND CVWASSDPTF 
IHRPIWIGGY PHVAPEDLKN IISPEVSSTV ECIMKKLRGE VRAP