| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1624 |
|---|
| Symbol | |
|---|
| ID | 5056375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1462626 |
|---|
| End bp | 1463513 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640469165 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_001153830 |
|---|
| Protein GI | 145591828 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00256903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCGC TTGAGGTAAT CGAGTTTTTG AAGCAGTACA AGAGGGAGAG CTACAAGGCT
GCTCTTGTGG GTGCGTATAG AAATGGGAGG TATGTAGATC CGCCCCCGCT TAAGACTAGT
CTTTCTCTAC TTCTTTTGCC TCTTGGGTTC TCTGCTGTGC CCATTCTCCT CGTTAAGGAC
GTTGTGGCTC AGTGGTTGTT GGGCATCGCC ATAATTACGG GGTCTTATCT CGCGATGTAC
TTCTACCTGA GGAGGAACTG TTTTGTGCCT GATGTGGTGA AGGTTGTTAG GACTAACTAC
GGCGACCTTG ACTTTCTTAA AAGACATAAG TTGCAGATTT TGGAAAACCC AGAGGTTTTG
CCCAGCGACT ATGAGTACTA CTACGCACCT GTAAACGTCT GTGTGGCGTG GGATAAAAAG
GCCAACGCCT TTACGCTTGA CGGGCCCAGA GGCCCTGTCA TATACTTTAC CAGCGGCATA
TTTGCGCGGC TCACCCCGGA GGAGCTCCAG GCGGTGTTAG AGCACGAAAG GGGGCACATT
AAGTATAGGC ATACATATAA ACTACTCCTC TTCCTCTTGG CGGAGTATAC CATGCGCCTC
CCTCTTGTGC ACCTGGTCTA TGCGAAGATT TCGATGGTCC TGCTAGCTAT CCACCTCATG
GGGGTGGCCC TAGTCTACAC CGCGCTGTTG CAGGCTTTTG AATTCGAGGC CGACAAATAC
GCCGCGGCTA GGCACAGGGA GAGCCTCGTC TCGGCCCTCG TCAAGCTTGA CTGGAACGGG
ATAGTGGAGT CGTTGCTCAA CCCCTTGGCG GCGAGGATGA CGCTTCTCAC GAGGACCCAC
CCGCTTACAA TAGACAGGAT CAGGAAGCTA CATGCAATTC CTAAATAG
|
|---|
| Protein sequence | MNALEVIEFL KQYKRESYKA ALVGAYRNGR YVDPPPLKTS LSLLLLPLGF SAVPILLVKD
VVAQWLLGIA IITGSYLAMY FYLRRNCFVP DVVKVVRTNY GDLDFLKRHK LQILENPEVL
PSDYEYYYAP VNVCVAWDKK ANAFTLDGPR GPVIYFTSGI FARLTPEELQ AVLEHERGHI
KYRHTYKLLL FLLAEYTMRL PLVHLVYAKI SMVLLAIHLM GVALVYTALL QAFEFEADKY
AAARHRESLV SALVKLDWNG IVESLLNPLA ARMTLLTRTH PLTIDRIRKL HAIPK
|
|---|
| |