Gene Pars_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1572 
Symbol 
ID5055455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1422411 
End bp1423757 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content59% 
IMG OID640469113 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001153778 
Protein GI145591776 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000195086 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGTTAGGG TAGTGGTGAT TGGAGGCGGG GCGGCCGGCG CCTCCGCAGC CGCCAGGGCC 
AGGAGGTTAG ATCCAAACGC CGAGGTAATA CTAATAGAAA GAGGGTCAAT GATAACGCAC
GCCCCTTGCG GCATGCCCTA CGCAATTGGG GGGATCGTGA AGAGCCACGA GGAGCTTCAG
ACCTACACGC CGGAGGAGTT TGAGAAGGAG CGCAACATAA AGGTGCTAAT CAGAACGGAG
GTTGTAGACA TAGACACAGA TAAGAAGACG GTAACTGTGA GAAGGGGCGG AGCCCAGGAG
ACAATAATTT GGGACAAGCT GGTGATCGCA ACGGGCGCTA AGCCGCTTGT CCCGAGGATC
GCCGGCGTAG AACTTAAGGG TATCCTTACC ATGAGGCACC CCGACGACGT GCCCACGATC
AAAGGCCATC TGGAGAAGGC GAAGACGGTA GCCGTGGTGG GGGGCGGGTA CATAGGCGTA
GAAATGGCGG AGGTGTTGTT GGAGCTTGGG AAGAAGGTTC TCCTCTTCGA GCAGTTTGAT
CAAGTACTTC CCGGCGCTCT CGACGCCGAC GTAGCGGCGT TGGTTGCAGA AGAGATGAGG
GCAAAGGGCG TGGAGCTACA CCTAGGGGAG AAGGTAGTTG AGTTCAGAGG CGCAGAACAC
GTGAACAAGG TGGTGACCGA GAAGGGGGAG TACCAAGTAG ACGAGGTGGT GCTGGCAGTG
GGGGTGAGGC CCGACGTAGA TCTCGCCGTA AGGGCCGGGG CGAAGCTGGG AGAGACCGGT
GCCGTCTATG TGAACGAGTA TATGGAGACC ACGGTGCCCG ACGTATACGC GGCTGGGGAC
GTGGCGGAGA AGGTGCATAG GGTAACTGGA AGGAGGGTGT GGATCCCACT GGCGCCAACG
GCGAATAAGG AGGGCCAGGT GGCGGGCGGA AACGCGGTGA GGGGCCGAGT GCTCAAGTTC
CCCGGCGTTG TGGGCACCGC CGTCACTAAG TTCTACAACC TCTACATTGC CAGGACGGGG
CTAAGCGAGA AGGAGGCAAA CGCCCTAGGG CTTAAGGCCC AGAGCGCGTT GATAAAGGCG
AGGACAAAGG CGCATTACAT GCCGGGGGCC GAGACGGTGC ATGTGAAGCT AATCGCCGAG
GAGTCCACTG GGCGATTGCT AGGCGGGCAG ATAGTGGGCA AAAGCCCCGT AGTGGCGGCC
TATGCCGACA TCTTGGCAGT GGCCGTGCAG TCGGGATACG CCGTGTCGGA CCTCTTCTTC
TCCGATATAG GCTATATGCC GGACACGGCG CCGGTGTGGC ATCCGTTAAT AGTTGCGGCT
AGGGTTTTGA GTAGAGGAAA ATTATAA
 
Protein sequence
MVRVVVIGGG AAGASAAARA RRLDPNAEVI LIERGSMITH APCGMPYAIG GIVKSHEELQ 
TYTPEEFEKE RNIKVLIRTE VVDIDTDKKT VTVRRGGAQE TIIWDKLVIA TGAKPLVPRI
AGVELKGILT MRHPDDVPTI KGHLEKAKTV AVVGGGYIGV EMAEVLLELG KKVLLFEQFD
QVLPGALDAD VAALVAEEMR AKGVELHLGE KVVEFRGAEH VNKVVTEKGE YQVDEVVLAV
GVRPDVDLAV RAGAKLGETG AVYVNEYMET TVPDVYAAGD VAEKVHRVTG RRVWIPLAPT
ANKEGQVAGG NAVRGRVLKF PGVVGTAVTK FYNLYIARTG LSEKEANALG LKAQSALIKA
RTKAHYMPGA ETVHVKLIAE ESTGRLLGGQ IVGKSPVVAA YADILAVAVQ SGYAVSDLFF
SDIGYMPDTA PVWHPLIVAA RVLSRGKL