Gene Pars_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1497 
SymbolvalS 
ID5054816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1354940 
End bp1357339 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content58% 
IMG OID640469039 
Productvalyl-tRNA synthetase 
Protein accessionYP_001153705 
Protein GI145591703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.702651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCAAA GGCTACCCAC TCGTTGGGAT ATTCGGTGGG AAGAAGACCT TATAAAGATT 
TGGGACAACG AGGGCAGATT CAAGACAAAG ATAAGCGGAA CGCGGCCGGT CTTCGTCATC
GACACGCCGC CTCCCTACCT CTCCAGCAAC AGGCCCCACA TCGGCCAGAC GGCTTCCTAC
GCCCACTTCG ACATGATAGC TCGGTTTTTG AGAATGCGCG GTATCGACGT GATCTTCCCC
TTCTACGCAG ACAGAAACGG CCTCCCCATA GAGGTGCAGG TAGAGAAGAA GTACGGCATC
GTGGCGCACG AGGTCCCGCG GGAGAAGTTC ATTCAGATGT GCAAAGAAGA GCTGGACAGA
TACGAGGGCG AGTTCGTCGC ATCGCTGAGG AGGTGGGGGC TCTCCTTCGA CTACTGGCCC
AACGGCACGG ACAGCCCCGA GTACCGCAGA ATGACCCAGA GCACCTTCAT AGAGCTGTGG
CGCCGGGGCC TCGTCTACGA GGCGGAGAGA CCCACGCCTT GGTGCCCCCG CTGTAGGACG
GCGCTGGCGG AACCTGAGAT CGAGTACAAG GAGGAGGAGA CATACCTAAA CTACATCAAG
TTCAAGGTAA AGGAGACCGG TGAGGATATA ATCATCGCCA CGACGCGCCC CGAGCTCCTC
CCCGCCACTG TGGCCGTCAT CTTCCACCCA GACGACCAGC GCTACAATAG GCTTGAGGGC
CTCCACGCCG TGGTGCCTCC GGAGGGGCAG GTGGTGCCCA TCCTCCCTCA CAGAGCCGCC
AATCCGCAGT ACGGAACTGG GCTGGTCATG ATCTCCACCT TCGGCGACAC GAGAGACCTC
ATGATAGTCA ATGAGCTGAA GCTACCCATA AGGATAATTG TAGACGAGGC GGGCCGTATC
AACTCCGGGA AGTACGCCGG CTTGACAATA AGGGAGGCCA GGGCCAAGAT AATAGAAGAT
TTAAAGGTAG CCGGCCTCCT TGTCAAGCAG GAGAGGCTGG TGCACAACGT CCCCGTCTGC
TGGCGTTGCA AGACGCCGCT TGAGATCATC GTCACCAGGG AGCTGTTCAT AAAACAGATA
GAGTTCAAGG ACAAGCTCAT AGAGCTGGCC AACAAGATGG AGTTTAAGCC CCCCGAGTAC
AGGCAAGTCC TCATCGACTG GATCAAGTCG CTGGAACTCG ACTGGCCCGT GTCGCGGAGG
CGGTACTACG CCACCGAGAT CCCCATATGG TGGTGCGTTA AGCCAAACGG CGAGAGGGTA
CCCATAGTCC CCAAGGGAGG CGAGTACTAC GTCCCGTGGA GAGACCCGCC GCCGCCCGAG
GTCAAGGAGG CGTGTAAAGA CGGCAGGCTC GAGGGCGACA CCCGCGTATT CGACACCTGG
ATGGACTCCT CCATCTCGTG GATGTACGCC TCGGGCTACA CCAAGGAGTT CAACGTCTTC
CCGAAGGTCT ACCCGCACTC CATAATGAGA CCCCAGGGCT ACGACATCAT CAGGACGTGG
CTCTACTACT CCCTCCTCCG TGCCTATCTC CTATACGGCA ACGTGCCGTT TAGGTACGTG
AGGATAAACG GCATGGGCCT CGACGAGAAG GGAGAAGCCA TGCACAAGTC GAAGGGCAAC
GTCATAGACC TCCTAGCCCC AGTGGAGAAG TACGGCGCCG ACGCCGTGAG GTTCTGGGCC
GCCGCCGCCG GGAGGCTGGG CTCAGACTAC CGCTACAACG AAAACATCAT AAAAGAGGGC
AAGGAGTTCG TCACCAAGGT GTGGAACATA TCCCGCTTCG TCCTCTCCTT CCCCGAACCC
ACAGATAAGC CGGAGCTAAC GCCGGTAGAC AAGGCCATAC TTGCCAAGCT ATACCAAGTA
GCGAAAAGAG CCATCTCCGC ATTTTCAGAT CTCGACGTCT ACGAGCCGGC CCACCTCCTC
TACAACTTCA TATGGCACGA ATTCGCCGAC CACTACATAG AGCTGGCTAA GTCAAGGGCA
TACAACAGAG ACAGCACATT TACACAAGAG GAGCAGAGGG CAGCCATCTG GACTCTCTAC
GCAGTGTGGA AGTACAGCCT GAAGCTCCTG GCGCCGATAA TGCCCTTCGT CACCGACAAG
ATCTGGCGCC TCGCCTACGG CAGATCCATC CACGACGAGA CAATAGAAGA CCCACCAGAG
GAGTGGAGCT GGGGCGATGC CTCGCTCTTC GAGCTGTTGA AGAAGATAAA CAGCGCTGTG
TGGCGGTATA AGAACAGACA AGGCATGAGC CTCGCGGCGA GCCTAGACAA GGCTCTGTAC
GTGCCTGAGG CCGCTCTGCA GGCAGCCAAG GACTTGAAAT ATACGCATAA GGTCCTCGAC
GTGAGGCCTG GCCGCGGCGC CGAGCAGATA GACGACGAGG GCCTCGTCTG GATAGGCTAA
 
Protein sequence
MSQRLPTRWD IRWEEDLIKI WDNEGRFKTK ISGTRPVFVI DTPPPYLSSN RPHIGQTASY 
AHFDMIARFL RMRGIDVIFP FYADRNGLPI EVQVEKKYGI VAHEVPREKF IQMCKEELDR
YEGEFVASLR RWGLSFDYWP NGTDSPEYRR MTQSTFIELW RRGLVYEAER PTPWCPRCRT
ALAEPEIEYK EEETYLNYIK FKVKETGEDI IIATTRPELL PATVAVIFHP DDQRYNRLEG
LHAVVPPEGQ VVPILPHRAA NPQYGTGLVM ISTFGDTRDL MIVNELKLPI RIIVDEAGRI
NSGKYAGLTI REARAKIIED LKVAGLLVKQ ERLVHNVPVC WRCKTPLEII VTRELFIKQI
EFKDKLIELA NKMEFKPPEY RQVLIDWIKS LELDWPVSRR RYYATEIPIW WCVKPNGERV
PIVPKGGEYY VPWRDPPPPE VKEACKDGRL EGDTRVFDTW MDSSISWMYA SGYTKEFNVF
PKVYPHSIMR PQGYDIIRTW LYYSLLRAYL LYGNVPFRYV RINGMGLDEK GEAMHKSKGN
VIDLLAPVEK YGADAVRFWA AAAGRLGSDY RYNENIIKEG KEFVTKVWNI SRFVLSFPEP
TDKPELTPVD KAILAKLYQV AKRAISAFSD LDVYEPAHLL YNFIWHEFAD HYIELAKSRA
YNRDSTFTQE EQRAAIWTLY AVWKYSLKLL APIMPFVTDK IWRLAYGRSI HDETIEDPPE
EWSWGDASLF ELLKKINSAV WRYKNRQGMS LAASLDKALY VPEAALQAAK DLKYTHKVLD
VRPGRGAEQI DDEGLVWIG