| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1319 |
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| Symbol | |
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| ID | 5054071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1190719 |
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| End bp | 1191435 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640468865 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001153534 |
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| Protein GI | 145591532 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000351697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGGGGA ACGGGTCTGT TAAAGTCCCG CGGCACATCG CGGTCATCCC CGACGGGAAT
AGGCGCTACG CCAAGAAGGT TGGCCTGGAC TTCTACCACG CCTACAAGAG GGGGGTGGAG
AAGGTACGGA GCTTCCTCAC CTGGGCGCTT GAGTTTGGCG ATATTAAAAA CGTGACTTTC
TACGCCCTGT CCACGGAAAA CCTCCAGAGG AGCAGGGTGG AGTTGGAAAT CCTTTTCCGC
ATATTCGAGG AGGAGTTCAA GAAGACGATT GAAGACCCCC TCATCCACGA GAACAAGGTG
AGAATTAGGT TCATCGGCGA CAGATCTATC ATACCGGGTA GACTCGTGAA GCTTATGGAA
GAGCTTGAGT CTGCTACGAG TAGTTACTCA GAACGCCACC TCACCTTTGC ATTGGGATAT
GGGGGGAGGG CAGAAATAGT CCGGTGCGTG AAGCGCATCA TCTCAGGGGA GGTAAAGCTG
GCGGAGATCA ATGAGGAGTC GCTATTCCAG TGCCTAGATA CGAGAGACTT GCCAAACCCG
GAGCCAGATG TCGTCATCAG GACGGGTGGG GAGAAGAGGC TGAGCAACTT CCTCCTCTAC
CAGACGGCTT ATTCCGAGCT GATTTTTCTA GACAAGCTCT GGCCGGAGAT CGAGAGGGAG
GATCTCCTAT ACGTGGTGGA GGAGTATTCG AGAAGGCAGA GGAGGTTCGG TAAATAG
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| Protein sequence | MWGNGSVKVP RHIAVIPDGN RRYAKKVGLD FYHAYKRGVE KVRSFLTWAL EFGDIKNVTF
YALSTENLQR SRVELEILFR IFEEEFKKTI EDPLIHENKV RIRFIGDRSI IPGRLVKLME
ELESATSSYS ERHLTFALGY GGRAEIVRCV KRIISGEVKL AEINEESLFQ CLDTRDLPNP
EPDVVIRTGG EKRLSNFLLY QTAYSELIFL DKLWPEIERE DLLYVVEEYS RRQRRFGK
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