Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1292 |
Symbol | |
ID | 5054476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1167838 |
End bp | 1168737 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640468838 |
Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
Protein accession | YP_001153507 |
Protein GI | 145591505 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.46518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.800906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATG TGCACATACC AGACGGATAC CTAGATCCCT ACATGGCGGG CGCCACGTGG CTGATTGCGG CCATCTACCT CTATTTTGCC GTGAGGAAAA CGCCTAGGGA TCTTCTACCT AGAGTGTCGG CCGTAGCCGG CGCCATTTTC GTGGCCCAGA TGCTCAATTG GCCTATCCCA GGCGGCACCT CGCTTCACTT CGTCGGCGGG GCCTTCGCGG CTATGTACTT AAACAGCCCA TGGGCCGCCG GCATAGCCAT AGCGCTGGTC CTGGCAGTTC AAACACTTCT TTTTCACGAC GGGGGCATAA CGGCGTACGG CGCTAACGTC TTGAACATGG GCGTAGTGTG CGTCTGGATC GGATGGGCGC TGTGGAAGTT ATTAGAGAGG AGATACCCCC TTGCGGGGGC CTTCCTGGGA GGATGGCTCG GCATATTCAT AGCGGGAACT GCCGCTGGTC TCGAGATCGG GTTAATGCCG ACTATAGGCT ATCCGCTCTC GATCACGATC CCGGCAATGG CTATACCCCA CTTCCTCTTG GGAATCGTCG AGGGGGCAAT AACCGTAGCC CTAGTGGCAA CTCTGCGGCG CTACGGCATG ATGCCCGCGC AAATACCGGT CCTAGCCGAG GCCATGAGCA AGCGCTACCT AACACTCATC TTGATCTTTC TATTGATCTC GCCGATATTC GGCGTTATTC TGGCCAACGC GGTCGGCTAT GCTGAGCCCC TCGACAACGT AGCAGATATG TTGCACCTCA ACGAATCCGA GATAAACTGG ACTCCGTTTA AGGACTACAC GGTGCCAGGC TTACCCGACG TTGTAGGCTA TATAATAGCC GGCGCGATGG GCGTGGCCGT GTTCATACTG CTCACTTTGT TGTTCGAGAG AGGGAGATGA
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Protein sequence | MTDVHIPDGY LDPYMAGATW LIAAIYLYFA VRKTPRDLLP RVSAVAGAIF VAQMLNWPIP GGTSLHFVGG AFAAMYLNSP WAAGIAIALV LAVQTLLFHD GGITAYGANV LNMGVVCVWI GWALWKLLER RYPLAGAFLG GWLGIFIAGT AAGLEIGLMP TIGYPLSITI PAMAIPHFLL GIVEGAITVA LVATLRRYGM MPAQIPVLAE AMSKRYLTLI LIFLLISPIF GVILANAVGY AEPLDNVADM LHLNESEINW TPFKDYTVPG LPDVVGYIIA GAMGVAVFIL LTLLFERGR
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