Gene Pars_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1282 
Symbol 
ID5055215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1160075 
End bp1161043 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content56% 
IMG OID640468829 
Producthypothetical protein 
Protein accessionYP_001153498 
Protein GI145591496 
COG category[R] General function prediction only 
COG ID[COG5643] Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.692652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.303536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCT GTAATCCGCA TAACGTAGCC TGCGCCTTCA AGGAGCTTGG CAGAAAGCTC 
CTGGCCCTAA TCGAGGAGAA GATAGGCGCT TTAGGCCCGG AAAACGCCTT CGTCGCCACT
AACGCGAAGT TTCTGACCTC TAGAGGATAC AGCGTAGCTC CGGTCATGAC GGCGTTTCTA
GAAAAAGGGC TCGAGCTTTA CTACAACGTG GTGCCGGTCC ACTCGCCGTA TTATGCCGAT
TTACATCTGG TGGCATACAA CAAGGATTCC TCCAAAGGAG TATACGCGAG GGTCGCTAGA
AGCGCCGTGG AGAAAATCGC CGCATGCGAC CGGGCGACTG CGGATTACAT CAAGTGGGAG
CCCCTCTCGC CGGGAGGAGC TGAGGGGTGG AGCGATAAGG CCCGATATTT GACGATACTC
GCGGCATGGC TCTCGGGCGC TTCACATGAG CTGTTGCTAG GCGCGGAGTT GCACAATCAC
GTGTGCCCGG GCCTAATATC GGGCTATTTG ATCATACGCC GCCTGGAGGA ACTCGGCCTT
CTCAAACAAG GCGTCGAGAT AAAACTCGTC TCCGCACCGC CGTGGTGCAA GGACGACTTG
TTGATACAAG TCCTCGACGC GACGCCCGGC AAGAGGAACT TCTCCGTTAA GTTCTTAACG
GAAGATCGCC GGCAAGAGCT GAGGAGATCG TTGGGAGGAG ATCCCGCATA TATAGCGTTT
ATACACGACA GAGGGCGCGA GGAGGTTCTC GTGATCTCCT TCGACTGGGA GAAGGCTAGA
GAAATCGCCG GCGTGGTGGG GGACACCCCA AGTTCGAAGC TGGCCATGTC CGCCGCCTTG
TTGAGACACT TGGATGAGGC CGCGCAACTG ATCCACGTTA AACACGTAGA GGCAGGCGAT
CCGGAGCTCT TCGAGAAGGC ATCTCTTTCG GGAACCGATC CATATAAGAC AGTATTACTA
CATGAGTAA
 
Protein sequence
MKGCNPHNVA CAFKELGRKL LALIEEKIGA LGPENAFVAT NAKFLTSRGY SVAPVMTAFL 
EKGLELYYNV VPVHSPYYAD LHLVAYNKDS SKGVYARVAR SAVEKIAACD RATADYIKWE
PLSPGGAEGW SDKARYLTIL AAWLSGASHE LLLGAELHNH VCPGLISGYL IIRRLEELGL
LKQGVEIKLV SAPPWCKDDL LIQVLDATPG KRNFSVKFLT EDRRQELRRS LGGDPAYIAF
IHDRGREEVL VISFDWEKAR EIAGVVGDTP SSKLAMSAAL LRHLDEAAQL IHVKHVEAGD
PELFEKASLS GTDPYKTVLL HE