Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1214 |
Symbol | |
ID | 5056401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1099825 |
End bp | 1100670 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640468761 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_001153434 |
Protein GI | 145591432 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAA ATTCCTTATT TCACTCCAAA GAGAAATATT TTATAGTTCT GTATATCTCC GCGAACATGA AGTGGGCGGT GATCATCACG TCGGGCCGCC CCTCTAAGGC AGACCTTCTG GCAAGGTTGG TATTTAAACA CGGCGGGGAG GCCCTCTACC TGCCCGTTGT TAAGGTGGAA GAAAGGGGGG CAGATGCACA AGAAGTTCTG GAGGCCTTGG CTTGGAGCGA GGCTGTTCTT TTTATGACGG GGCAGTCCGC ATGGGGCCTT GCCGAGATGT TGAAGAGACA CAGCGCGTTG GAGAAGGCCA AGGAAATGCT CAGGTCCAGG GTGGTGGTGT GCAGGGGAAG CAAGGCATCT GGCAACGTCA AGACTCAGTT CGGCGTGGAG TGCCCCAACT TAGGCGAGAC CATCGATGAG ATGATGCCGA AAATTGGACA ATACGTCTCA GGCAAGAGGC TACTAGTGTC CTTTTACGGG GTGGTGGACA GCGAGCTTCT CGAAAAGTTA AGGGCTGTGG CCGGGGAGGT GAGCTACGTG CAGACATACA GCACAGTGGA GGCGCCGGAG GAAAACGCGT TGGAGGCGGC GAGGCGGGTG GCGGAGGGGG GCTACATAAT CGTCTTCACC AGCGCAGTGG GGGCAAGTAC CTTCTTCGCC GCGGCTCAGC GCCACGGCCT CTTGGAGAAG GTGGTAGAGG CGCTCAACTC TGGGCGCTCC ATAGCCGCTG TCATAGGCCC TGTGACGGAG GAGGAGGTGA AGAGGTGGGG CGTTGAGAAG GTGGTAAAGC CCGAGAAGCC CTTCTTGGCG TATCTAGCGG AGGAGCTAGC GAAGCTCCTC AAGTAG
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Protein sequence | MYKNSLFHSK EKYFIVLYIS ANMKWAVIIT SGRPSKADLL ARLVFKHGGE ALYLPVVKVE ERGADAQEVL EALAWSEAVL FMTGQSAWGL AEMLKRHSAL EKAKEMLRSR VVVCRGSKAS GNVKTQFGVE CPNLGETIDE MMPKIGQYVS GKRLLVSFYG VVDSELLEKL RAVAGEVSYV QTYSTVEAPE ENALEAARRV AEGGYIIVFT SAVGASTFFA AAQRHGLLEK VVEALNSGRS IAAVIGPVTE EEVKRWGVEK VVKPEKPFLA YLAEELAKLL K
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