Gene Pars_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1078 
Symbol 
ID5055587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp965555 
End bp966445 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content64% 
IMG OID640468634 
Producthomoserine kinase 
Protein accessionYP_001153308 
Protein GI145591306 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.323188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.147957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC CCTCCACCAG CGCCAATTTG GGCTCGGGCT TCGACGTAGT CGCAGTTGCC 
CACGACGCCT ACTTCGCCGA GGCCTACGCA TCGGTCGGTT CCGGTTGCGG CGTACACGTC
AGGTTCAAGG GCTTCGACCC CGGGAGCGAC AACACCGTGA CTAGGGCGTT TCTAAAGCTC
TTTGACCTAC TCGGCATCTG CCGGGGCGTC GAGGTGGAGG TGGTGAACAA CATACCCGTG
GCCAGGGGGC TCGGCAGTAG CGGCGCCTCG GCAGTGGCGG CGCTTGCGGC CTTCCTCAGA
GAGGCAGGAA TGAAGGTAGA CCCCCGCATC GTGGTGGAGG CGGCAGGCCA CGGGGAGGCC
GCCGCGGCCG GGAGCCCCCA CTTCGACAAC GTGGCCGGCG CAGCTCTTGG CGGCGCCGTG
GTGATTACGT CTTTAAACCC GCTGGACTTT GTCAAGTTCT CGCCCCGCCT CACCTTCGTG
GTGGGAGTCC CAGACGTACC GCCGATGCCA AACAAGACGA AGGTAATGAG GGAGGTTCTC
CCCAAGTCGG TGGAGTTCAA GACGTACGTT AAGCAAATCT CCCGCGTCGC GGCGCTGGTG
TCAGGCTTCG CCCGCTCCGA TCCTGCCCTA GTGGCCAGGG GCATGGCCGA CGACGTGGTG
GAGCCGGCAA GGGCGCCCCA CGTACCTGGG TACTCAAGAG TGAGGAAATA CGTCATGGAG
GCCGGGGCGC TGGCTGTGGC TATTTCTGGT GCAGGCCCGG CGGTGGTGGC GCTTGTTAAC
GAAAAGGAGG TAGACGCCGT GAGAAGCGCC GTGCTTAGGG CATACGCCGA GGAGGGGATA
AAAGCAGAGG CCAAGGTGGC TCAAATCGCC GAGGGGGCGC TAGAGACTTG A
 
Protein sequence
MKAPSTSANL GSGFDVVAVA HDAYFAEAYA SVGSGCGVHV RFKGFDPGSD NTVTRAFLKL 
FDLLGICRGV EVEVVNNIPV ARGLGSSGAS AVAALAAFLR EAGMKVDPRI VVEAAGHGEA
AAAGSPHFDN VAGAALGGAV VITSLNPLDF VKFSPRLTFV VGVPDVPPMP NKTKVMREVL
PKSVEFKTYV KQISRVAALV SGFARSDPAL VARGMADDVV EPARAPHVPG YSRVRKYVME
AGALAVAISG AGPAVVALVN EKEVDAVRSA VLRAYAEEGI KAEAKVAQIA EGALET