Gene Pars_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1038 
Symbol 
ID5054191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp924908 
End bp925672 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content56% 
IMG OID640468594 
Productzinc/iron permease 
Protein accessionYP_001153268 
Protein GI145591266 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.350201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.90903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTATAT ATATGCCAAT TGTAGTAGCC GTGGAGCCCC TATTGTATAA CGCAACACTA 
GTCACAGCGG GGACTCTACT AGGTGTTGCG GCTGGGCTAT TGGGGAGAAG TGGTGATAAG
TCAGTTGAAT TTGGGCTTGG GTTTACAGGT GGCGTTATGC TTATGGCCAG CTTTACCAGC
CTCATTCTTC CCGGCGTTGA GGGTTGGGGG TTTTGGCAAG TAGGGGCGGG GATAGCGGCT
GGGGTTGCCC TAGTCCACTT ACTGAACGCC GCCGTACCGC ACGAACACTT GATTAAGGGC
TACGAGGGTC CCGCGGCGAT GATAGGGAAA TTGAGGAAGA GCTGGCTCAT CGCCATGGCA
ATAACTATCC ACAACATCCC CGAGGGCCTC GCGGTCGGAG TCGCCACGGC CTACAGCGCC
GAGCTGGGGT TTGCCACAGC CTTGGCTATT GCCATACAGG ACGTGCCCGA GGGAGTCGCG
GTGGTCATGC CACTGCTGAG AATCGGCTTA AGAACTCCCA TCGTCGTAGG AGTCCTCAGC
GCAGTCGTTG AAGGCGCCTC TGTAATAGCC AGCGGGATAG GTGCCTCGGC GTTGCTTGCG
TTGCTTGGCG TAGCCATGGG CCTAGCGGGC GGCGCCATGA TATACGTAAC AGTGGCCGAG
CTCTTCCCAG AAATATACGC AGAGGGCAAA GACAAGAAAC AACCAACCTT CGGCTTCGTA
GCAGGCACTT TGACAATGCT CTTTTTAGAT ACCTTCTACA GCTGA
 
Protein sequence
MAIYMPIVVA VEPLLYNATL VTAGTLLGVA AGLLGRSGDK SVEFGLGFTG GVMLMASFTS 
LILPGVEGWG FWQVGAGIAA GVALVHLLNA AVPHEHLIKG YEGPAAMIGK LRKSWLIAMA
ITIHNIPEGL AVGVATAYSA ELGFATALAI AIQDVPEGVA VVMPLLRIGL RTPIVVGVLS
AVVEGASVIA SGIGASALLA LLGVAMGLAG GAMIYVTVAE LFPEIYAEGK DKKQPTFGFV
AGTLTMLFLD TFYS