Gene Pars_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1004 
Symbol 
ID5055186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp896328 
End bp897290 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content54% 
IMG OID640468562 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001153236 
Protein GI145591234 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.217464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTT CGCGGATAAG GTTGCCGCTC CCCGGCATGG AGCTTGGGCA TGTCAATATC 
TACGTGGTTA AGTGCAGTGA CGGCTACGGG CTAATTGATG TCGGCCTCGC CACGTACGAG
GCCGCACTCT CGTTGTTGAG GGGGTTAAAG GCTCTGGGCA TAAAGCCAAG CGACGTGACT
AAGGTATATG TCACACACTA CCACGCCGAC CACATAACCC TCGCCCAATT CCTCGCCGAG
ATTGCCTCGC CGGATTTCCA CATAGGCGAG GGAGAGCTAA GACACGTGGC CTCCTCTTTT
GAGGAACTGG CAAAGATGTA CGCCGAGGAG TACAAGAAGC ACGGCGCCCC TGCCGAGGTG
GCCGAGGCCT TTCTTAAAGT CCACCCCATG TCGAGGTATA GAAAAGCATT TGAGGATGTG
TGGAAGATTT CTTGGAGACA GGTTAGAGAC GGCGAGGAAC TCGACTGCGG GCTAAAGGCG
GTGTCAACCC CCGGTCACAC GCCAGGCCAC ACTGTATATG CAATGCGAGG AGGCGTATTC
ACCGGCGACC ACGTACTACC GAAGATCACC CCCAACATCT CATGGTACCC CCTCCCGGGC
TTCAACCCGC TCAAAGAGTA CCTAAACAGT TTGAGAAAAA TCCGCACCAG CGCAAGAGGC
TTCCCAGCCC ACGGAGATGA AATTACCGAC ATAGCTACGA GAGTTGATGA GCTTTTGAGA
CACCACGAGA AGAGGTTAGA AGAAATACTC TCAGCGCTGA GTGAGCCTAT GACCACCTAC
GAAGTTGCAA AGAAAATCAG CTGGGACGCT GGGCCCTTCG ACCAGTTCGA TGTGTATAAC
AAAATCTTCG CCATAGGCGA GGCCTACAGC CACTTAATGT ACCTAGAAGA CGCGGGCCTC
GTGAAGAAAA TTGACGGAGA AGTAATACGC TGGAGACGGG TTAGCCGCCG AACGGCGGTA
TAA
 
Protein sequence
MTFSRIRLPL PGMELGHVNI YVVKCSDGYG LIDVGLATYE AALSLLRGLK ALGIKPSDVT 
KVYVTHYHAD HITLAQFLAE IASPDFHIGE GELRHVASSF EELAKMYAEE YKKHGAPAEV
AEAFLKVHPM SRYRKAFEDV WKISWRQVRD GEELDCGLKA VSTPGHTPGH TVYAMRGGVF
TGDHVLPKIT PNISWYPLPG FNPLKEYLNS LRKIRTSARG FPAHGDEITD IATRVDELLR
HHEKRLEEIL SALSEPMTTY EVAKKISWDA GPFDQFDVYN KIFAIGEAYS HLMYLEDAGL
VKKIDGEVIR WRRVSRRTAV