Gene Pars_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0626 
Symbol 
ID5055942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp556737 
End bp557183 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content57% 
IMG OID640468184 
Product30S ribosomal protein S6e 
Protein accessionYP_001152869 
Protein GI145590867 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.798108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.959135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACTT TCAAGCTAGT GCTATCAGAT CCAATCAGCG GGAAGGCGAT GCAGTTCGAG 
ATAAAAGATC CGCTTGCACA GCGCTTCGTC GGGTTGAAAA TAGGAGACGA GATAGACGGC
GTAATACTGA AGGACTTCAT ATCGCTACCC AAAGGCGCAA AGATCAAAAT AACCGGCGGT
AGCGGCATAG AGGGCGCGCC CATGGTCCCC GGCGTCCCGG GGCCAGTCAA GCGCTACATC
CTCGCAGAGG GCCCGCCGGG CTACCGCCCA AAGAAGCGGG GAATGCGTAG GAAGAAACTC
GTGAGGGGGG ACACAATCAG CGACTCCATC GTGCAGATAA ATGCGGTGAT CGTCTATCCC
AAAGACTACA GCGGCCCGCC CGCGATTCCG ATAGGCGCAA AGGAGCTGGA GAAGTTGACA
AAAAAGGAGG AGGCCGCCGC CCAGTAA
 
Protein sequence
MPTFKLVLSD PISGKAMQFE IKDPLAQRFV GLKIGDEIDG VILKDFISLP KGAKIKITGG 
SGIEGAPMVP GVPGPVKRYI LAEGPPGYRP KKRGMRRKKL VRGDTISDSI VQINAVIVYP
KDYSGPPAIP IGAKELEKLT KKEEAAAQ