Gene Pars_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0458 
Symbol 
ID5055416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp403723 
End bp404271 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID640468023 
Producthypothetical protein 
Protein accessionYP_001152708 
Protein GI145590706 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA ACGTGGTCAA CTCGGTCAGT AAGACCCTCG ACAAGCTGTA CGGAGAGCCG 
CTGAAGCAGC TGGAGACGTT GATAGGAGCC ACCGGACTCC CCGTATACAA GGACCCGAAA
AGCGGGGCGC TGTTGTGGGT AGACGTCCGC GAGCTGAGGC TGAGGTTCAC CCTCTCCGTA
AACAAAATCG CCAAGTTCGT AGACGGGCTC AGAGAGGGGA AGTTGCTCTA CACAGTCTGC
AAGAGGTGCG GCGCCAAGTA CTTCCCACCC CAGGCAGACT GCCCCAGGTG CAAGGCTTCT
GACATGGAGT GGCGCGAGAC GAGCCCAGTG GGGGAGCTAA TAACGTGGAC TGTGATCAAC
GTCAAGCCCG CCAGCTTCTC GCACCACGCC GACTACGTCG TCGGCATAGT CAAGATGCCA
GACGGGTTCA ACATCACCGC GTGGGTCGAG GCCGACCCAA AAACTCTAAA ACCAGGAATG
AAGATGAGAC TCCTCGTCGA CAGGAGGCCC GGAGAGAACT ACATAACCTA CTGGTTCAAG
CCCGCCTAG
 
Protein sequence
MSDNVVNSVS KTLDKLYGEP LKQLETLIGA TGLPVYKDPK SGALLWVDVR ELRLRFTLSV 
NKIAKFVDGL REGKLLYTVC KRCGAKYFPP QADCPRCKAS DMEWRETSPV GELITWTVIN
VKPASFSHHA DYVVGIVKMP DGFNITAWVE ADPKTLKPGM KMRLLVDRRP GENYITYWFK
PA