Gene Pars_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0456 
Symbol 
ID5055521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp401308 
End bp402540 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content56% 
IMG OID640468021 
Productbutyryl-CoA dehydrogenase 
Protein accessionYP_001152706 
Protein GI145590704 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.820933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTCC CATTCGACTC CGTAGAGGAC TTCTCGGTTG TGTTGACCCC CGAACACGAA 
ATGTTTAGAA AGGCTGTACG GGAGTTTTTG GAGAGGGAGG TGGCGCCCAA GGCCATGGAG
GTGGAGGAGA CAGACCAGGT GCCCCGAGAT CTTTTGAAAA AGATAGCGGA GCAGGGGTTC
TTTGGTATTG GAATACCTGA GAAATACGGA GGCCAGGGCG GAGACCACAG AATGGCCGTG
ATCATGTCTG AGGAGTTCTG CCGCGTCTTG CCCGGCCTAA GCGTTTACTT CGGCACCAAC
GAGCTGTTCC TCACCCCCAT AATGCTCTAC GGCACTGAGG AGCAGAAACA GAAGTACGTA
CCCCCCATCG CCCGCGGCGA GAAGTTCGGC GCTTTTGCAG TTACTGAGCC CTGTTGCGGC
TCCGACGTCG CCGGCATACA GACAAAGGCG GAGAAGAAGG GGGACAAGTG GGTAATTAAT
GGAAGGAAGG CGTTTATCAG CAGTTCCGAC GTGGCCGACT ACTTCATCGT ACTCGCAAGG
ACGTACCCGC CGCCTGACAA GAGGCTGAGG TATCTAGGCC TCACCTTCTT CGTGGTAGAG
AAAGACACGC CGGGGTTCAA GGTGGAGCAG TGCTACCACA AAATGGGCTT GTTTGGGAAC
CACGCCTGTG AGCTGGTTCT CGAGAATGTG GAGGTGCCTG ACGAGAATAG GGTTGGGGAG
GAGGGGATGG GCTTCCTATA CGCCATGGAG ACCTTCGACC GCACGAGGAT CGGCGTGGCG
GCGCAGGCCG TGGGGATGGC CCAGGCGGCT TTTGAGATGG CGTTCCGCTA CGTACACCAG
AGACAAGCCT TCGGCTACCC CATAGCCTTC TTCCAAGCAA TCCAGTTCAG CATCGTCGAG
ATGATGGCGA AGATCTTCTC CGCAAGGCTA TTGACATACC TCGCCGCAAA ACTCGCCGAC
GAGGACAGGA GAGAGTTCAC CTTCGTCGCC TCTCTGGCGA AGTTCTACGC TACCGAGGTA
GCCGAGGAGG TCATTTCAGA GGCGATAAAC CTACACGGCG GGGTTGGCGT CATTAGGGAG
ACGGGAGTTG AGAGGTTTTT GAGAAGCGTG AAGATCACCC AGATATACGA GGGCGCAAAT
AATATCCAAA AACTTGTAGC CTACCGCCAG TTAGTAAGGC TACTGAAGGA GAAGGGGCAG
ATCCCAGACG AAGTAGCCAA GCTAGTCACC TAA
 
Protein sequence
MVFPFDSVED FSVVLTPEHE MFRKAVREFL EREVAPKAME VEETDQVPRD LLKKIAEQGF 
FGIGIPEKYG GQGGDHRMAV IMSEEFCRVL PGLSVYFGTN ELFLTPIMLY GTEEQKQKYV
PPIARGEKFG AFAVTEPCCG SDVAGIQTKA EKKGDKWVIN GRKAFISSSD VADYFIVLAR
TYPPPDKRLR YLGLTFFVVE KDTPGFKVEQ CYHKMGLFGN HACELVLENV EVPDENRVGE
EGMGFLYAME TFDRTRIGVA AQAVGMAQAA FEMAFRYVHQ RQAFGYPIAF FQAIQFSIVE
MMAKIFSARL LTYLAAKLAD EDRREFTFVA SLAKFYATEV AEEVISEAIN LHGGVGVIRE
TGVERFLRSV KITQIYEGAN NIQKLVAYRQ LVRLLKEKGQ IPDEVAKLVT