Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0450 |
Symbol | |
ID | 5054441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 393529 |
End bp | 394233 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640468015 |
Product | ABC transporter related |
Protein accession | YP_001152700 |
Protein GI | 145590698 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.68217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGA GAGTTTCAAA CTTGGTGTCG GGATACGGCA GGTTGCAGGT ACTGTTCGGT GTATCATTCG AAGCGCCCAG CGGCTCGGTT GTGTCGATTC TTGGCCCTAA TGGCGCTGGC AAAACCACGA CGTTGCTAAC AGTAATGGGG GTTGTGAAGC CGTGGGACGG CGTCGTTGAG CTCGAAGGCG TAGACGTGAC GCGGCTCCCA CCGCACAGAA AAGTAGAGCT CGGAATATCC CTCGTCCCAG AGGGTAGGAG GCTTTTCCCA GAAATGACCG TGGAAGAGAA CCTCCTGATG GGCGCCTACA CGAAGAGGGC AAGGGATAAG ATCCACGACA GCCTTGAGTT GGTGTATTCG CTATTCCCGC GGCTGAAGGA GAGAAGAAAG CAGAAGGCTG GCACCATGAG CGGCGGGGAG CAACAAATGC TGGCGGTGGC TAGGGCCCTC ATGGCTAGGC CCAAGGTGTT GCTAATAGAC GAGCCCAGCG CCGGTCTGGC CCCCAAAGTC GTGGCAGACC TATTCCAGAC AATAAGCCAA CTAAAAAAAG ATATGTCAGT CCTACTAGTC GAGCAAAACG TCGCCGCGGC GCTTGAGATA AGCGACTACG CATACGTGTT AGAAAACGGG AGAATAATCC TCCACGGACC CGCCGGCGAG TTGATAGAAA ACGAGCACGT AAAAAAGGCG TACCTGGGAG TATAA
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Protein sequence | MALRVSNLVS GYGRLQVLFG VSFEAPSGSV VSILGPNGAG KTTTLLTVMG VVKPWDGVVE LEGVDVTRLP PHRKVELGIS LVPEGRRLFP EMTVEENLLM GAYTKRARDK IHDSLELVYS LFPRLKERRK QKAGTMSGGE QQMLAVARAL MARPKVLLID EPSAGLAPKV VADLFQTISQ LKKDMSVLLV EQNVAAALEI SDYAYVLENG RIILHGPAGE LIENEHVKKA YLGV
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