| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0414 |
|---|
| Symbol | |
|---|
| ID | 5054961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 362797 |
|---|
| End bp | 364338 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640467979 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_001152666 |
|---|
| Protein GI | 145590664 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTGGG AGGTTGTACA CAGGGCTACC GAGTATATCG CCGAAGAGGC CGGCATCGCG
TTGAGGAATT CAGCCTTCTC GCCCAATATA AGAGAGCGTA TGGACCACAG CGTCGCGGTT
GTAGACGCCG AGGGCCGCAT TGTGGCTCAG GCAGAGCACA TCCCGGTCCA CCTAGGCTCC
TTCCACGTGG GTGTGCAGAA CCTTCTAGAA TATTTGAGGA GGGAAGGGGT GGAGCTGGAG
GATGGGGACG CTGTGCTCAC GAACGACCCC TACATATCGG GTACGCATCT AAACGACGTG
ATGGTGCTCT ACCCCGTGTT CTGGCACGGG AGGCTCGTCG CTTATATAGC GTCTAAGGCC
CACTACGTCG ACGTCGGGGG GCCGTTGCCG GCGTCGCTAA ACCCGAGGGC TAAGACTATA
TACGAGGAGG GGGTCGTGGT GCCTCCTGTG AAGATATTGA GGCGCGGCGC AATGAACAAG
GAGGCGTTGA GCTTTATCTT GGAGAACTTC AAGACGCCTG TAGTTGCAAG AGGCGATCTC
GAGGCCCAGC TGGCAGCGTC GCGTGTAGGG GCGGCAAGGG TGAAGGACTT ATTCGAGAGG
TTTGGCGACG TGTCGGAGCA GTGGAATGAG GCTATAGAAT ATGGCAGAAG GCTCGCGCTC
GCGGAGATCG CCACGTGGCC TCCCGGCAGA TATGAGGCTG AGGACTACCT AGATTGGGGC
GGCGAGCTCC TCCCCATAAG GCTAGCCCTG GAGATATCTG AGAAGGGCGT GAGGGCAGAC
TTTGAGGGCA CCGCGAGGCA GGTCGACGCG CCGCTAAACG CTGTCATAGG CGTCACCTTC
TCAGCCGTGT CATTTGCGGT GCGGTCAGCC ATAAGGGGCT ACATCCCCAC AAACTACGGC
TTCTACAGCC TCATAAAGCT AGACGCACCT GCAGGTTCCA TAGTAAACCC CCTCAAGCCC
GCTGCTGTGG GCGCCGGCAA CTTGGAGACG AGCCAGAGAG TCGCCGACGT CACGTTTCTG
GCGCTGTCCA AGGCGCTACC TGGGAGGATA CCCGCGGCGG GTTCCGGCAC TATGATGAAC
GTCATGATGG GCGGCTTCTG GCAAGGGCGG TACTGGTCAT ACTACGAGAC AATAGGCGGA
GGGACTGGGG GCAGGCCCAA CGGCCCCGGC GTGTCGGGCG TGCACGTCAA CATGACAAAC
ACGCTGAACA CGCCGATTGA AATTGCGGAG AGGGAGTACC CCATAAGATT CACTGCATAC
CGAATAAGGG AGGGAAGCGG AGGACGCGGG AGGTATCCAG GCGGAGATGG TATAGTTAGG
GCGTTCAAGG CACTGGCACC CACTACGCTG TCCATAATTG CAAGCAGGCT CGCAGTAGGG
CCTTGGGGCC TAGAAGGCGG CGAGCCTGGC AAGCCAGGGA AAATAACTAT AAAGAGAAGC
AGTGGCAGAG TCGAGTCCAT CGGTAGCGAG ACAGTGACGC TAGCAGAGGG AGACGAGGTG
GTCATAGAGA CGCCGGGTGG GGGCGGGTAC GGCAAGCCGT AA
|
|---|
| Protein sequence | MRWEVVHRAT EYIAEEAGIA LRNSAFSPNI RERMDHSVAV VDAEGRIVAQ AEHIPVHLGS
FHVGVQNLLE YLRREGVELE DGDAVLTNDP YISGTHLNDV MVLYPVFWHG RLVAYIASKA
HYVDVGGPLP ASLNPRAKTI YEEGVVVPPV KILRRGAMNK EALSFILENF KTPVVARGDL
EAQLAASRVG AARVKDLFER FGDVSEQWNE AIEYGRRLAL AEIATWPPGR YEAEDYLDWG
GELLPIRLAL EISEKGVRAD FEGTARQVDA PLNAVIGVTF SAVSFAVRSA IRGYIPTNYG
FYSLIKLDAP AGSIVNPLKP AAVGAGNLET SQRVADVTFL ALSKALPGRI PAAGSGTMMN
VMMGGFWQGR YWSYYETIGG GTGGRPNGPG VSGVHVNMTN TLNTPIEIAE REYPIRFTAY
RIREGSGGRG RYPGGDGIVR AFKALAPTTL SIIASRLAVG PWGLEGGEPG KPGKITIKRS
SGRVESIGSE TVTLAEGDEV VIETPGGGGY GKP
|
|---|
| |