Gene Pars_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0317 
Symbol 
ID5056316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp275773 
End bp276333 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content56% 
IMG OID640467894 
Productpeptidase M50 
Protein accessionYP_001152581 
Protein GI145590579 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCT CACTAGTTGT GCTTTCCTTA GGCTTCTCGA TTGTGCTTGC ACGTAGCGGA 
CCATTGGGTG TTGTTCGCTG GTGGGACGTC CTCCTCCTTT TCCCCTTTGT GGCCTTCGTC
TTATTATTTG CCTTTCTGGG CCACGAGTTG GCTCATAGAC AGGTGGCCAG GAGGCTCGGC
TACTATGCAT ACTACCAGGC TTACTATTAC TTGTTGCCTC TCGCGGTGAT TCTCCCGCTC
TTCTTCGGCT TTGTCTTCGC GGCGCCTGGC GCCGTTGTGA TTTCGCCTTA CCGCCTATAC
GGCGGCGGAG ACCCGAGGCG GGATGAGTTT TTTATAGCCG CCAGCGGCCC CGTTGCCAAC
ATTGCCTTTG CGTTGGTGGG ACTGCTCCTC TGGGAGACCT CTCCCTTCTG GCAATTCTTC
GCTTACATAA ACGCCTGGCT CGCCTTCTTC AACCTTCTGC CAATACCGCC GCTTGACGGT
AGCAAGATGG TGAAAACAAA GCCGGCCCTA TGGCTCCCCA CGATAGTGGC GGCGGGGTTG
TTGGTGTGGA GGCTTTGGTG A
 
Protein sequence
MAISLVVLSL GFSIVLARSG PLGVVRWWDV LLLFPFVAFV LLFAFLGHEL AHRQVARRLG 
YYAYYQAYYY LLPLAVILPL FFGFVFAAPG AVVISPYRLY GGGDPRRDEF FIAASGPVAN
IAFALVGLLL WETSPFWQFF AYINAWLAFF NLLPIPPLDG SKMVKTKPAL WLPTIVAAGL
LVWRLW