Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0214 |
Symbol | |
ID | 5054611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 193541 |
End bp | 194245 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640467793 |
Product | ABC transporter related |
Protein accession | YP_001152481 |
Protein GI | 145590479 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.271955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGCG CAGTGCAGTT AGCCAAGAGG TTTGGGAAAA TAGAGGCCTT GAAAAACGTG ACGCTTGAGG TTAACCAGGG CGAGGTGGTG GGGCTCGTCG GGCCCAACGG GGCGGGCAAG ACCACGACGC TGAGGATACT CGCCGGCCTG TTGAGGCCGG ACGCAGGCTA CGCGGAGGTC CTCGGCGTGA GGACAACTTC GCCCGAGTTT AAGAAGGTTA AGAGATGGGT GGCGTACCTC CCCGAGGAGG TTATGCCCTA CGACAACTTA ACAGGTAGGG CCTTCATAGA GTTCGTCCAC GGGCTCTACG GCGTGGATAA CGTAAAGGAG GCGGTGGAGA TATCGGGGCT GGGCCCACGG ATAGACGACA AGGTTAAGAC ATATTCAAAG GGCATGAGGA GGAGGCTCGT CGTCGCCGCC TTGCTCACCG CGGGGGCAAA GGCGCTGTTG CTAGACGAGC CCACGTCGGG CGTAGACGTC ATACACGCCG TGGAGATTAG GAGGCTCGTA AGGGAATACG CCGTCAGCAG AAAAGCTACT GTGGTGTACT CGAGCCACAA TATGCTGGAG GTCGAGAGCA TATGCGACCG GGTGTACTTC ATAAACAACG GCGTAGTGGT AGACAGCGGG GCCCCGAGGG ATCTGGCGGC TAAGTACTCC GCCGCCAACT TAGAGGAGGC CTTTGTCAGG GCTGTGGGCT TCTAG
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Protein sequence | MIRAVQLAKR FGKIEALKNV TLEVNQGEVV GLVGPNGAGK TTTLRILAGL LRPDAGYAEV LGVRTTSPEF KKVKRWVAYL PEEVMPYDNL TGRAFIEFVH GLYGVDNVKE AVEISGLGPR IDDKVKTYSK GMRRRLVVAA LLTAGAKALL LDEPTSGVDV IHAVEIRRLV REYAVSRKAT VVYSSHNMLE VESICDRVYF INNGVVVDSG APRDLAAKYS AANLEEAFVR AVGF
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