Gene Pars_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0214 
Symbol 
ID5054611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp193541 
End bp194245 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content59% 
IMG OID640467793 
ProductABC transporter related 
Protein accessionYP_001152481 
Protein GI145590479 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.271955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCG CAGTGCAGTT AGCCAAGAGG TTTGGGAAAA TAGAGGCCTT GAAAAACGTG 
ACGCTTGAGG TTAACCAGGG CGAGGTGGTG GGGCTCGTCG GGCCCAACGG GGCGGGCAAG
ACCACGACGC TGAGGATACT CGCCGGCCTG TTGAGGCCGG ACGCAGGCTA CGCGGAGGTC
CTCGGCGTGA GGACAACTTC GCCCGAGTTT AAGAAGGTTA AGAGATGGGT GGCGTACCTC
CCCGAGGAGG TTATGCCCTA CGACAACTTA ACAGGTAGGG CCTTCATAGA GTTCGTCCAC
GGGCTCTACG GCGTGGATAA CGTAAAGGAG GCGGTGGAGA TATCGGGGCT GGGCCCACGG
ATAGACGACA AGGTTAAGAC ATATTCAAAG GGCATGAGGA GGAGGCTCGT CGTCGCCGCC
TTGCTCACCG CGGGGGCAAA GGCGCTGTTG CTAGACGAGC CCACGTCGGG CGTAGACGTC
ATACACGCCG TGGAGATTAG GAGGCTCGTA AGGGAATACG CCGTCAGCAG AAAAGCTACT
GTGGTGTACT CGAGCCACAA TATGCTGGAG GTCGAGAGCA TATGCGACCG GGTGTACTTC
ATAAACAACG GCGTAGTGGT AGACAGCGGG GCCCCGAGGG ATCTGGCGGC TAAGTACTCC
GCCGCCAACT TAGAGGAGGC CTTTGTCAGG GCTGTGGGCT TCTAG
 
Protein sequence
MIRAVQLAKR FGKIEALKNV TLEVNQGEVV GLVGPNGAGK TTTLRILAGL LRPDAGYAEV 
LGVRTTSPEF KKVKRWVAYL PEEVMPYDNL TGRAFIEFVH GLYGVDNVKE AVEISGLGPR
IDDKVKTYSK GMRRRLVVAA LLTAGAKALL LDEPTSGVDV IHAVEIRRLV REYAVSRKAT
VVYSSHNMLE VESICDRVYF INNGVVVDSG APRDLAAKYS AANLEEAFVR AVGF