Gene Pars_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0105 
Symbol 
ID5054717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp92366 
End bp92956 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content59% 
IMG OID640467684 
Producthypothetical protein 
Protein accessionYP_001152372 
Protein GI145590370 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.612279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTATA GAGAGAGGGA GGTCGTCTGC GAGCCGGCCT CGCCTCCGTT CGCCGTGCGG 
CTAGATGGCG TGGGTTTTGG CTCGAGGCTG AGAGATTTTC CCCACCCGCG GAGCCGGCTT
GTCCACAACG CGTTGGTAGA AGTCGCCAGG ACCATCGCCC AGACATACGG GGCTGACTTC
GCCCACGTGG TCAGCGACGA GATAAACCTA TTTTTTCACA GACTAGCGCC GTACGGAGGT
AGGACTTTCA AAATCATCAG CGTCTTGGCC GGCCACGCCT CGGCTGAGGC CACAGCGTTG
CTGGGCCGTC CCCTTTACTT CGATGGGAGG GTGGTGAAGC TCCGCGACTT GTGCGACGCG
GCCACTTACT TCCTCTTCCG GGCCAGGGTC GGGTTAAATA ACTACGCCGT CCAAATCGCG
AGGGGCATGG GCCTACTACG CGAGCGAACG CCGCCTATTG GGGAGGTTGT TGCGAAGATT
AAAATCGACG ACTACGAACT TGCTTGGGGG GCTTTTCTCG AAAAAGAGAG GGGATACAGG
AAAGAGGTGG ATGTGTGCAA CGCCCTCTCT TCTCTGTGCA ACGTCTGCTA G
 
Protein sequence
MRYREREVVC EPASPPFAVR LDGVGFGSRL RDFPHPRSRL VHNALVEVAR TIAQTYGADF 
AHVVSDEINL FFHRLAPYGG RTFKIISVLA GHASAEATAL LGRPLYFDGR VVKLRDLCDA
ATYFLFRARV GLNNYAVQIA RGMGLLRERT PPIGEVVAKI KIDDYELAWG AFLEKERGYR
KEVDVCNALS SLCNVC