| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0089 |
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| Symbol | |
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| ID | 5054298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 81366 |
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| End bp | 82361 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640467668 |
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| Product | H/ACA RNA-protein complex component Cbf5p |
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| Protein accession | YP_001152356 |
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| Protein GI | 145590354 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase
[TIGR00451] uncharacterized domain 2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGGTGCA GTCAGAGAGA GGTTTTCGTC AAGAGGGAGG AGCCTACAAA TCCTGAGTGG
GGTAAGCCGC CCTCCCAGAG AACTGCTGAC GAGTATATAC GGCACTCATT TGTGATTTTA
GACAAGCCTC GGGGGCCTAG TAGCCACGAG GTGGCGGCGT GGGTGAAGAA GATTCTGGGC
GTGGAGCGGG CCGGCCACGC GGGGACGCTG GACCCGAAGG TGTCGGGGGT GTTGCCAATT
GCAGTGGCTG AGGGGACTAA GGTGTTGATG GCCCTGTCTA GATCCGACAA GGTCTATGTG
GCTGTGGCTA AGTTCCACGG AGATGTGGAT GAGGAGAGGC TTAGGGCTGT GTTGCGGGAG
TTTCAGGGAG AGATATACCA AAAGCCGCCG CTCCGCTCTG CGGTGAAAAG GCAGTTGCGG
ACGCGTCGGG TTTTCTCGCT TGAGCTTCTA GAGTTGGAGG GGCGGTATGC CGTTATTAAG
ATGCATGTTG AGGCTGGGAC ATACGCCCGC AAGATTATAC ACGACATCGG CGAGGTTCTC
GGCGTAGGCG CCAATATGAG AGAGTTGAGG CGCGTGGCAG TCACCTGCTT TACTGAAGAC
GAGGCTGTTA CTTTGCAAGA CGTGGCCGAC GCGTATTATA TCTGGAAGAA ATACGGCGAC
GACACGTATC TAAGGAGCGT CCTGTTGCCT ATTGAGGAAA TTGCCAGGCA TTTGCCGAAG
ATTTGGGTAA GGGACAGCGC CGTAGACGCC GTGTGCCACG GCGCACCTCT AGCTGCGCCG
GGCATATCGA AGTTCGAGGT GCCGTTTTCC AAGGGGGACA TAGTCGCCAT GTTTACTCTG
AAAGGCGAGC TTGTAGGGAT TGGTAGGGCT CTGGTAGACT CGGAGGAGGT GAAGAAAATG
GAGAGGGGGG CCGTGGTTAG GACAGACAGG GTCGTCATGA GGCGGGGCAC ATATCCGGCT
ATGTGGAAGA AAGGCCAAAG AGCCGCAAAA ACTTAA
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| Protein sequence | MRCSQREVFV KREEPTNPEW GKPPSQRTAD EYIRHSFVIL DKPRGPSSHE VAAWVKKILG
VERAGHAGTL DPKVSGVLPI AVAEGTKVLM ALSRSDKVYV AVAKFHGDVD EERLRAVLRE
FQGEIYQKPP LRSAVKRQLR TRRVFSLELL ELEGRYAVIK MHVEAGTYAR KIIHDIGEVL
GVGANMRELR RVAVTCFTED EAVTLQDVAD AYYIWKKYGD DTYLRSVLLP IEEIARHLPK
IWVRDSAVDA VCHGAPLAAP GISKFEVPFS KGDIVAMFTL KGELVGIGRA LVDSEEVKKM
ERGAVVRTDR VVMRRGTYPA MWKKGQRAAK T
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