Gene Pars_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0086 
Symbol 
ID5055589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp79428 
End bp80330 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content55% 
IMG OID640467665 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001152353 
Protein GI145590351 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGAGT TCGTCATAAG AAGCGATGCG TATACAGACG ACGAGAGGCT AGCCATAGGC 
ATCGGACTCT CCGCAATATT TAGACAAGTC CTCGTCGAGG CGAGGCCCAG CAAGGAGGCG
CTGAGGGCTA TAGGCGATGC GGTTTGGGGG GCGCTGTTGA TAACCCCATG TCCAGAAGAG
CTTCCCTGTT TTAACGACGT GGAGAAGGCA ACAGATTACT CGGAAATATA CTCAACCCCA
GTCGGCTACG AGGGGCCTAT CCCCAAAACC AAGGAGAGGA GGGCTCCCAC TTTTAACAAG
CACTACATGA AGCCCTGGCG CTGGGCCAGA GGGGGGGAGA GGCTGGAGGT GGGCCACTGG
CTGTTGCCGC TTATGGCTTG TCTCTACACA AAGCTTAAGC TGTTAGACGC CGTGCCGGTA
GTTGTGTCAG ATGTCAGAAT ACAGCCTAGT TCAAACAGCT CCCCAGACTA CATGGTGGCG
CCCACATGGC ACCTGCCGAC AGAGGTCGCG GAAGTGGTGG ACATACATTT GCCCCCTCTA
AAGGCCTCGG CCATCGCCCT GGGAATTTTA ATCGGCAACT ACAACGCAGG CCCCGTAATA
GCAATTGTAA AACAACACGA CGCCATTGTA AAAGAGCTCG TTGAAAGAGG CGGCTACGCG
GTGGTGCTAG AATGCCCCGG AGATCCATGC GATATATTCC GCGAACGCGT AGTGGGCTAC
ACGCCCCACA AGCACAGATA CGTCGTAGAA CCCTCGCTAT GTGACAAATG CGGCGATTGT
CTAAAATCGG CGTGCCCAGC CATCGTCCCA ACACCACAGG GCGTGCCTAA AATACTGGAC
ACGTGCACAG GCTGCGGCGC ATGCGCCGTA CTATGCACAA GGAAAGCCAT CCAATACGAC
TAA
 
Protein sequence
MVEFVIRSDA YTDDERLAIG IGLSAIFRQV LVEARPSKEA LRAIGDAVWG ALLITPCPEE 
LPCFNDVEKA TDYSEIYSTP VGYEGPIPKT KERRAPTFNK HYMKPWRWAR GGERLEVGHW
LLPLMACLYT KLKLLDAVPV VVSDVRIQPS SNSSPDYMVA PTWHLPTEVA EVVDIHLPPL
KASAIALGIL IGNYNAGPVI AIVKQHDAIV KELVERGGYA VVLECPGDPC DIFRERVVGY
TPHKHRYVVE PSLCDKCGDC LKSACPAIVP TPQGVPKILD TCTGCGACAV LCTRKAIQYD