| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0076 |
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| Symbol | |
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| ID | 5054375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 71029 |
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| End bp | 72783 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640467654 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001152343 |
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| Protein GI | 145590341 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.101904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTTG GCGAGTTGGT AAAGGCGCTG GCCGCCGTCG AGTCCACGAC GCAGAGGAGC
GTAATGGTGA AGCTTTTGGC CTCGCTCTTC AAGAAGGCGT TGCCTGAGGA GATAGACAAG
GTTATCTACT TGATTTTGGG GGATCTGAGG CCTCCTTGGG AGGGCCTTGA GCTAGGGGTG
GGGGAGAAGC TGTGTCTCAG AGCTTTGGCA AAGGCCACTG GGACATCCCA GGCGGAGCTG
GAGTCTATGT ATAAGAAGAC GGGCGACATA GGCGAGGCGG CGCGGCGGGC TCTTGCATCG
TCAAAGCGAC CGGGGCTTCT GGCTTTCGGC TCGCAGAAGC CGCTGGAGGT GTCCGAGGTC
TACGATGCCC TTATCAAGGT GGCGAGGGCG ACCGGCGAGG GGGCGCAAGA CATGAAAATC
GCCCTCCTCT CCTCGCTTTT TGCCAGGTCC TCTCCTGAGG AGGGGAAGTA CATCGCCCGT
TTTGTTGTTG GGAAGCTTAG GCTCGGCGTT GCCGACATGA CGATAATCGA GGCGCTGGCG
GATGCCTACG GCGTGAGGAA GGAGGATTTA GAGAGGGCCT ACCACGTCTA CCCCGACCTC
GGCCACCTCG CCAAGCTCGT CGCCTCCGGG AAGCCCCTGG ACGAGGTGAA GGTGACGCCT
GGCGTCCCCG TCCTCCCCAT GTTGGCGCAG AGGCTCTCCT CGTCGTCTGA GATCTTGGCT
AAACTGGGAG GCGCAGCGAT ATGTGAGTAT AAATACGACG GGGAGAGGGC GCAGATACAC
ATCTCGCAGA GCGGCGTGAG GATTTTCAGC CGGAGGCTTG AGGACATCAC CCACGCCTAC
CCGGACGTGG TCAAGGCCGT GAGGGAGGCC GTGTCGGCGA GAGAGGCCAT ACTGGAGGGG
GAGATCGTTG CGGTGGATCC AGACACCGGC GAAATGTTGC CGTTTCAAGA GCTTATGCAC
AGGAAGAGGA AGCACGAGGT GGCGGCGGCG ATGGAGATGT ACCCCACAGT CCTCTACCTC
TTCGACATCG TGTACGTCGA CGGGGAGGAT TTGACCAACG AGCCTTTGAT ATACCGCCGC
GTGAAGCTTT CTGAAATAGT CCATGAAAGC GACAAGGTGC AAATAGCGAA GTGGCAGATG
TTCGACGACC CGGATACTGT TGATGTGTTT TTCCACGAGG CAGTCTCAGT GGGCACAGAG
GGCCTGATCT GTAAGTCGCC GACGTCGGAG TACGAAATGG GAGCGAGGGG GTGGAACTGG
ATTAAGTACA AGCGCGACTA CAAGAGCGAG ATGATAGATA CGGTGGATCT AGTGGTGGTG
GGGGCCTTCT ACGGCCGTGG AAAAAGAGCC GGCCTCTACG GCGCCTTTCT CCTAGCCGCC
TACGACCCCT CCAGTGATAT GTTCTACACC GTGTGCAAAG TGGGCAGCGG CTTTACAGAC
GCAGATTTGA AGAAAATGTA TGAGATCCTC CAGCCTCTAA AAATACCTCA CAGACACCCC
CGGGTATCAT CAAAGATGGA GGCCGACGTG TGGTTTGTGC CGCAGGTGGT AATAGAGGTA
ATTGGCGCAG AGATCACTCT CTCTCCGCTA CACACTTGTT GTCTTGGCGC CGTTAGGCCT
GGGGTTGGGC TAGCGGTGAG GTTCCCCCGC TTCACTGGCC GCTATAGGAC AGACAAGGGG
CCGGAGCAAG CCACCACAGT CGCCGAGATG CTAGAGCTCT ACAAAAGGCA GAAAAAGGTG
GCTCAGCCTG AGTAG
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| Protein sequence | MQFGELVKAL AAVESTTQRS VMVKLLASLF KKALPEEIDK VIYLILGDLR PPWEGLELGV
GEKLCLRALA KATGTSQAEL ESMYKKTGDI GEAARRALAS SKRPGLLAFG SQKPLEVSEV
YDALIKVARA TGEGAQDMKI ALLSSLFARS SPEEGKYIAR FVVGKLRLGV ADMTIIEALA
DAYGVRKEDL ERAYHVYPDL GHLAKLVASG KPLDEVKVTP GVPVLPMLAQ RLSSSSEILA
KLGGAAICEY KYDGERAQIH ISQSGVRIFS RRLEDITHAY PDVVKAVREA VSAREAILEG
EIVAVDPDTG EMLPFQELMH RKRKHEVAAA MEMYPTVLYL FDIVYVDGED LTNEPLIYRR
VKLSEIVHES DKVQIAKWQM FDDPDTVDVF FHEAVSVGTE GLICKSPTSE YEMGARGWNW
IKYKRDYKSE MIDTVDLVVV GAFYGRGKRA GLYGAFLLAA YDPSSDMFYT VCKVGSGFTD
ADLKKMYEIL QPLKIPHRHP RVSSKMEADV WFVPQVVIEV IGAEITLSPL HTCCLGAVRP
GVGLAVRFPR FTGRYRTDKG PEQATTVAEM LELYKRQKKV AQPE
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