| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0074 |
|---|
| Symbol | |
|---|
| ID | 5056000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 69743 |
|---|
| End bp | 70510 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640467652 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001152341 |
|---|
| Protein GI | 145590339 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5373] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.100299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACATCG AGCTCTTCGT GGTGGCCGGG CAGTCGGCTG AGCTTGAAAA CTCTCTTAAA
AAAGTCGTGG AGGATCTCAG GGGGCAGGTC CAGAGACCTG ACAAGATTAG GCTTGCCACA
GTGAAGATTA GGCCAGACGC GGTGGATCAG GTGCTGAGAC TTGTGGGGGA GCCGCCCGAG
AGGGTGCCTC CGCACTACAG ATCTCTTGTG AATATGTTGA AGAAGTACGG AATTACGAGG
TTCCCCGCCG TCGTCGTCGA CGGCGTAAAG GTGGGAGAGG GCGATGTGGC CGTGGAAAAC
GTTCTTCGGG CAATTCAAGA CAGGGCCCGT GCGGAGTTTC CAGAACTTGC CTCGCTGGAG
CTTGTCCCGC CGAGGCCTAC CCCGGCCCCC GTTCAGCCTG TGGTGAAGGA ACTGCCGCCG
CCCCAGCCGG TAGCCTCGCC TCCTCCCCCG CCGCCTGCTC CACCTCCCCC GCCTCCCCCA
CCCGAAATCA CGCCGGTGGA GGCTGTCTCC CCCAGAGCCG AGCCCAAGCC TATTGAGCCC
TCCCCGCCGC CTCCTCCGCC TGCGATTGCT CCCCCTCCAC CTCTTCCGCC CCCTCCAGTT
GCTCCGCGTG CCCTCACGGC TGTTGTGAAG CTGGTCTTGG GGCGGCCTGA CAACTGTGGG
GAGTGTGCGT ACTACGGCCA GTTGACGTCG CGTTGTTTCT TGTTCGGCTT CGCGGTGTCT
AATCCGGCTT CGCCGCCTTG CAAGCAATAT GCTAGAAGTG GAGGTTAA
|
|---|
| Protein sequence | MYIELFVVAG QSAELENSLK KVVEDLRGQV QRPDKIRLAT VKIRPDAVDQ VLRLVGEPPE
RVPPHYRSLV NMLKKYGITR FPAVVVDGVK VGEGDVAVEN VLRAIQDRAR AEFPELASLE
LVPPRPTPAP VQPVVKELPP PQPVASPPPP PPAPPPPPPP PEITPVEAVS PRAEPKPIEP
SPPPPPPAIA PPPPLPPPPV APRALTAVVK LVLGRPDNCG ECAYYGQLTS RCFLFGFAVS
NPASPPCKQY ARSGG
|
|---|
| |