Gene Pars_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0064 
Symbol 
ID5054597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp50116 
End bp52023 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content52% 
IMG OID640467644 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001152333 
Protein GI145590331 
COG category[R] General function prediction only 
COG ID[COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain 
TIGRFAM ID[TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTTTA TAGAAGTAGA AAATAAAGTA AGGTCTATTC TTTCCGGTGT TGATATAGTC 
AAGGTAAGCT ACGAAGGCCC GAACTTGTGT ATATATGTAA AACGTCCCAC AGAGACCGTA
TTAGACATGG CAGGTGAGGT TGCGAAGACG TTAAAAAAAC GCGTAGTTAT AAGGGTAGAC
GCGAGCAGTA GGTTCCCTGA GAAAAATGCC GCTAAGATAA TTAAAGAACT GCTCGGTGAT
GCTATTGACG ATGTGAAGTT TGAAAACAGC GGCGATGTGT ATATCTACCT GGCAAGACCT
CTGAGAGAAC GGGAGATTAG AGAGATTTCG CGAGAAATTT TTCTAAAAAC CGGCTGGAGG
GCCGTCATAG AGAGCGGAGT GCCTAAAGAT GGAGTAAAGC TACCTAGACA CGAAATTGTC
GGCGTGCGCC AAGTCTACCA CCAGGCATAT TCCCAGAGGG CGGAGCTTAT GGACCTCTTG
GCGAAGTACA TCCACCAAGA GCCCGTACTG AAAGAGGGCC CCATCACGGT CACGTTTCTG
GGCGCCGCCA TGGAGGTGGG TAGAAGCGCT ATTCTCGTAA GCACCACGGA GAGCAACGTT
TTGCTGGACT GTGGGCTGAA GCCGAGCCAA TACGACGAGG ATTTCCCCAT GTTGGACCTA
GTGGATATTG ATAGGCTTGA CGCCGTTGTG TTGACCCACG CTCACATGGA CCACGTCGGC
TGCCTCCCGT TTCTATTCAA GTACGGCTAC AAGGGGCCTG TGTATATGAC AGACCCCACT
AAGTACCAGG CCTTCATCCT CTTGACAGAC TACGTGGAGC TTAAGGAGAG GGAGGGGCTC
CAGCCGAGCT TCTCCAAGGC AGACGTGGAG GCTGTCATAT ACCACACCAT CACCCTTGAC
TACGAGGAGG TGACCGACAT CGCGCCGGAT ATTAAACTCA CGTTTTACGA CGCAGGCCAC
GAAATAGGCT CCGCCATGGC CCACTTACAC ATCGGCAACG GCCGCTACAA CATCTTATAC
ACGGGCGATT TCAAATACGG CAAGACTAGG CTTTTGAACA GGGCTGTGAG CAAGTTTAAG
CGTGTCGAAA TGTTGATAAT GGAATCCACA TACGGAGGAA AAGACGACGT GCAACCCCCG
AGGCATGAGG CGGAGAACGC CTTGGCTAAA CACATCTCCG AAACTGTCTC GAAAGGGGGA
AAAGTGTTGA TACCCGCCTT CAGCACGGGG AGGGGCCAAG AGATCCTCTA CATCCTTAAC
AAAATGATGG ATGGCGGCTT AGTGCCCCGC GTTCCGATAT ACGTCGACGG GATGATAGTG
GAGACGCTCA ACGTCTACTT AATGTACCCC CACTACCTCA ACCCAGAAGT GGCCGAGGAG
ATCTACGGCG GCGTTAATCC ATTCACCACC TCGGGCAACG TGGTGATTGT AGATAGGGCC
AAGAGGGTCG AGGATAGGAT TAACCAAGTG GCTAAGATCG CCCAGAGCGA GGAGCCTGCC
ATAATTATAG CCCCCCACGG CATGCTAAAC GGAGGCCCCG TCTTGGACTA CTTCGCCCAG
CTTGCCCCCG ACGATAAAAA CAAGCTGGTC TTCGTCTCCT ATCAAGCCGA GGGGACAATC
GGCAGGCGTA TCCTAAACGG CGAGCGGGAG TTCGTAGTGA GGAGTCTCGT AGGCGGTGAG
TCTAAGATCA ACATGCGCAT GGAGGTAGTC TCCATACCAG GCTTCTCGGG CCACAGCGAT
AGGAGAGAAC TTATGAAATA CGTAGAGCAC ATAGAGCCAA AGCCGAAGAA GATAGCGCTT
ATACACGGGG AGCCTTCTAA AATAATTAGC CTCGCCACGT CAATTGAGCT GAAGTATAAG
ATCACAACAG TGATACCGAA GGTGGGAGAG AGGATTAGGG TTCTGTGA
 
Protein sequence
MSFIEVENKV RSILSGVDIV KVSYEGPNLC IYVKRPTETV LDMAGEVAKT LKKRVVIRVD 
ASSRFPEKNA AKIIKELLGD AIDDVKFENS GDVYIYLARP LREREIREIS REIFLKTGWR
AVIESGVPKD GVKLPRHEIV GVRQVYHQAY SQRAELMDLL AKYIHQEPVL KEGPITVTFL
GAAMEVGRSA ILVSTTESNV LLDCGLKPSQ YDEDFPMLDL VDIDRLDAVV LTHAHMDHVG
CLPFLFKYGY KGPVYMTDPT KYQAFILLTD YVELKEREGL QPSFSKADVE AVIYHTITLD
YEEVTDIAPD IKLTFYDAGH EIGSAMAHLH IGNGRYNILY TGDFKYGKTR LLNRAVSKFK
RVEMLIMEST YGGKDDVQPP RHEAENALAK HISETVSKGG KVLIPAFSTG RGQEILYILN
KMMDGGLVPR VPIYVDGMIV ETLNVYLMYP HYLNPEVAEE IYGGVNPFTT SGNVVIVDRA
KRVEDRINQV AKIAQSEEPA IIIAPHGMLN GGPVLDYFAQ LAPDDKNKLV FVSYQAEGTI
GRRILNGERE FVVRSLVGGE SKINMRMEVV SIPGFSGHSD RRELMKYVEH IEPKPKKIAL
IHGEPSKIIS LATSIELKYK ITTVIPKVGE RIRVL