Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0064 |
Symbol | |
ID | 5054597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 50116 |
End bp | 52023 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640467644 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001152333 |
Protein GI | 145590331 |
COG category | [R] General function prediction only |
COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTTTA TAGAAGTAGA AAATAAAGTA AGGTCTATTC TTTCCGGTGT TGATATAGTC AAGGTAAGCT ACGAAGGCCC GAACTTGTGT ATATATGTAA AACGTCCCAC AGAGACCGTA TTAGACATGG CAGGTGAGGT TGCGAAGACG TTAAAAAAAC GCGTAGTTAT AAGGGTAGAC GCGAGCAGTA GGTTCCCTGA GAAAAATGCC GCTAAGATAA TTAAAGAACT GCTCGGTGAT GCTATTGACG ATGTGAAGTT TGAAAACAGC GGCGATGTGT ATATCTACCT GGCAAGACCT CTGAGAGAAC GGGAGATTAG AGAGATTTCG CGAGAAATTT TTCTAAAAAC CGGCTGGAGG GCCGTCATAG AGAGCGGAGT GCCTAAAGAT GGAGTAAAGC TACCTAGACA CGAAATTGTC GGCGTGCGCC AAGTCTACCA CCAGGCATAT TCCCAGAGGG CGGAGCTTAT GGACCTCTTG GCGAAGTACA TCCACCAAGA GCCCGTACTG AAAGAGGGCC CCATCACGGT CACGTTTCTG GGCGCCGCCA TGGAGGTGGG TAGAAGCGCT ATTCTCGTAA GCACCACGGA GAGCAACGTT TTGCTGGACT GTGGGCTGAA GCCGAGCCAA TACGACGAGG ATTTCCCCAT GTTGGACCTA GTGGATATTG ATAGGCTTGA CGCCGTTGTG TTGACCCACG CTCACATGGA CCACGTCGGC TGCCTCCCGT TTCTATTCAA GTACGGCTAC AAGGGGCCTG TGTATATGAC AGACCCCACT AAGTACCAGG CCTTCATCCT CTTGACAGAC TACGTGGAGC TTAAGGAGAG GGAGGGGCTC CAGCCGAGCT TCTCCAAGGC AGACGTGGAG GCTGTCATAT ACCACACCAT CACCCTTGAC TACGAGGAGG TGACCGACAT CGCGCCGGAT ATTAAACTCA CGTTTTACGA CGCAGGCCAC GAAATAGGCT CCGCCATGGC CCACTTACAC ATCGGCAACG GCCGCTACAA CATCTTATAC ACGGGCGATT TCAAATACGG CAAGACTAGG CTTTTGAACA GGGCTGTGAG CAAGTTTAAG CGTGTCGAAA TGTTGATAAT GGAATCCACA TACGGAGGAA AAGACGACGT GCAACCCCCG AGGCATGAGG CGGAGAACGC CTTGGCTAAA CACATCTCCG AAACTGTCTC GAAAGGGGGA AAAGTGTTGA TACCCGCCTT CAGCACGGGG AGGGGCCAAG AGATCCTCTA CATCCTTAAC AAAATGATGG ATGGCGGCTT AGTGCCCCGC GTTCCGATAT ACGTCGACGG GATGATAGTG GAGACGCTCA ACGTCTACTT AATGTACCCC CACTACCTCA ACCCAGAAGT GGCCGAGGAG ATCTACGGCG GCGTTAATCC ATTCACCACC TCGGGCAACG TGGTGATTGT AGATAGGGCC AAGAGGGTCG AGGATAGGAT TAACCAAGTG GCTAAGATCG CCCAGAGCGA GGAGCCTGCC ATAATTATAG CCCCCCACGG CATGCTAAAC GGAGGCCCCG TCTTGGACTA CTTCGCCCAG CTTGCCCCCG ACGATAAAAA CAAGCTGGTC TTCGTCTCCT ATCAAGCCGA GGGGACAATC GGCAGGCGTA TCCTAAACGG CGAGCGGGAG TTCGTAGTGA GGAGTCTCGT AGGCGGTGAG TCTAAGATCA ACATGCGCAT GGAGGTAGTC TCCATACCAG GCTTCTCGGG CCACAGCGAT AGGAGAGAAC TTATGAAATA CGTAGAGCAC ATAGAGCCAA AGCCGAAGAA GATAGCGCTT ATACACGGGG AGCCTTCTAA AATAATTAGC CTCGCCACGT CAATTGAGCT GAAGTATAAG ATCACAACAG TGATACCGAA GGTGGGAGAG AGGATTAGGG TTCTGTGA
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Protein sequence | MSFIEVENKV RSILSGVDIV KVSYEGPNLC IYVKRPTETV LDMAGEVAKT LKKRVVIRVD ASSRFPEKNA AKIIKELLGD AIDDVKFENS GDVYIYLARP LREREIREIS REIFLKTGWR AVIESGVPKD GVKLPRHEIV GVRQVYHQAY SQRAELMDLL AKYIHQEPVL KEGPITVTFL GAAMEVGRSA ILVSTTESNV LLDCGLKPSQ YDEDFPMLDL VDIDRLDAVV LTHAHMDHVG CLPFLFKYGY KGPVYMTDPT KYQAFILLTD YVELKEREGL QPSFSKADVE AVIYHTITLD YEEVTDIAPD IKLTFYDAGH EIGSAMAHLH IGNGRYNILY TGDFKYGKTR LLNRAVSKFK RVEMLIMEST YGGKDDVQPP RHEAENALAK HISETVSKGG KVLIPAFSTG RGQEILYILN KMMDGGLVPR VPIYVDGMIV ETLNVYLMYP HYLNPEVAEE IYGGVNPFTT SGNVVIVDRA KRVEDRINQV AKIAQSEEPA IIIAPHGMLN GGPVLDYFAQ LAPDDKNKLV FVSYQAEGTI GRRILNGERE FVVRSLVGGE SKINMRMEVV SIPGFSGHSD RRELMKYVEH IEPKPKKIAL IHGEPSKIIS LATSIELKYK ITTVIPKVGE RIRVL
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