Gene Pars_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0037 
Symbol 
ID5054322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp30774 
End bp31259 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content58% 
IMG OID640467617 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001152306 
Protein GI145590304 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID[TIGR00270] conserved hypothetical protein TIGR00270 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTGTG AGATATGCGG TCGTGTGATA GAGGGGGATC CGATACCTAT AGAGGTGGAT 
AAGGCGGTTT TGTATGTATG TAGGGGTTGC GCCGCGAGGT ATGGTAAGAG GGCTCCGCCC
CAGACCGTCC AGAAGAAGCC GCCGCAGTCA CAGAAGGCGA AGCCGCCTTC GCCGAGGCTA
CCCCCTGTTG AGGTGGAGTT AGTGGAGAAC TACGGCGAGG TGATAAGAGT CGCGCGGCAG
AATCTCGGCT TGTCCAGAGA GGCCTTGGCT GCTATGTTGG GGGTGAAGGA GACTGTGTTA
AGGAGGGTCG AGGCTGGGCA GTTGCAGCCG GACTACGCGC TTGCGAAAAA GCTGGAGAAG
GCGCTTGGGG TCAAGCTACT GGTTGAGGCA AAGGAGGAGG CTAGCGGCGC CAAGAGCGGT
GGGAAAGTGG AGAGGGGGCT GACGCTAGGC GAGGTGGTGG AGATCAGAGA AGACGGTGAG
AAATAA
 
Protein sequence
MYCEICGRVI EGDPIPIEVD KAVLYVCRGC AARYGKRAPP QTVQKKPPQS QKAKPPSPRL 
PPVEVELVEN YGEVIRVARQ NLGLSREALA AMLGVKETVL RRVEAGQLQP DYALAKKLEK
ALGVKLLVEA KEEASGAKSG GKVERGLTLG EVVEIREDGE K