Gene Pars_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0034 
Symbol 
ID5054708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp28356 
End bp29072 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content49% 
IMG OID640467614 
Producthypothetical protein 
Protein accessionYP_001152303 
Protein GI145590301 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG ATATTAAAAT TTTCAAACCA GTTGAAAATT ACGAAATTTT CATAACTGGT 
TTTGCGGGTA TAGGCATAGT TGGCCACCTC GCCACTAAGT ACATTGCGCG GAATTGCGAA
GTCGTTGGCG TCGTGCGGTA TAGGGGGGAG CCGCCTATTG TATCAATAGA GGGTGACCGG
CTCTTATTGC AAAACGAGAT ATTTTCCTGT GGCCGCGTTG TAGGTATTGT TAACAATTAC
GGCATTCACG AAGCCGCCGT CTATGATTAC GCCAGGGCAG TAGCGTCCTG GGTAGCGGCA
AATGAGTTTA AGACAGCGGT GCTTTTCGGC GGCCTTGACG GGAGGTTAAA AAGGGATGAC
GAGCAACTAC GCATAGTTTA CACCTCTGCG TACAAAAGAG CAGGACTGCC AACTGGTGAT
GCGAAAGTCC TTGAGCAGGG GTTGCAGATA GTGGGGCCAT TGGCATACCT TATATCGTTT
TTTGAAGAGC TCGACTTTCC GGCAATTGTG ATATTGCCGT ACGCAGATGT GACTAGGCCA
GCCGATCCCT ATGCAGCAAG CGTTGCTGTG GACTTCTTCT CGAAGCTCTA TAACTTCCAT
GTAGACACAA GCGGGTTGAG ACAGTTAGCT GAGGAGCTGG AGAGAGAGAT CGAAGAGGCG
CGGAGGCGGC TGGAGGAGCA AGCACGGCGC GAGGAGACCT CTAAGCTATA TATATAG
 
Protein sequence
MKIDIKIFKP VENYEIFITG FAGIGIVGHL ATKYIARNCE VVGVVRYRGE PPIVSIEGDR 
LLLQNEIFSC GRVVGIVNNY GIHEAAVYDY ARAVASWVAA NEFKTAVLFG GLDGRLKRDD
EQLRIVYTSA YKRAGLPTGD AKVLEQGLQI VGPLAYLISF FEELDFPAIV ILPYADVTRP
ADPYAASVAV DFFSKLYNFH VDTSGLRQLA EELEREIEEA RRRLEEQARR EETSKLYI