Gene Pars_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0028 
SymbolpyrB 
ID5055068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp21321 
End bp22238 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content52% 
IMG OID640467608 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_001152297 
Protein GI145590295 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGCGTG GTAGGGATGT CATAACAATG CGCGACTTCG GCAGAGGTGA ATTAGAGGAG 
CTTTTCGAGA CTGCGAAGTA CATGGAGAAA TACGCCAAAA GCCGTGTTGA TTTCTTAAAG
GGTAAGATCA TGGCCGTCGC CTTCTTTGAG CCGTCCACAC GGACTAGGCT AAGCTTTGAA
ACGGCAATGA GGAGGCTGGG AGGTGACGTA ATAGGCTTCT GGGGCGCCGA GGGGACCAGC
GTGGAGAAGG GAGAGACGCT CGCAGACACG ATAAGGATGC TAGATGCGTA TTCGAATATT
ATCGTCATTA GGCACAAGCT GGAGGGGGCC GCCAAGCTGG CCGCTGAGGT GGCGGAGAGC
CCCGTAATAA ACGGCGGGGA CGGCGCCTTT AATCACCCTA CGCAGGCAAT GTTAGACCTT
TACACCATAT GGCGCGAGTT CGGCCACATA GACGGCCTAA ACATAGGGCT TATGGGCGAT
CTACGCTATG CCAGAACTAT AAACAGCCTC CTGGAGGCTC TCGCGAATTT CGACGTAAGG
ACTTTTCTAA TCTCTCCGGA GTACCTACGC CCGAGGGCAG AGACTCTGGA CTACGTCAAG
TCGAGAGGCC TAAAGCTCAG CTTCCATACC AACGTGGAGG AGGTAATACA CGAGCTAGAC
GTGCTGTACG TAGTCAGAGT ACAGAGGGAG AGGTTCTTAG ACCCCCTCGA GTACGAAAGA
GTAAAGGGTA GCTACCGAGT CACGTTAGAA ATTCTAAAAA AAGCAAAGAA GCACCTAGCG
ATACTACACC CGCTACCCCG AGTCGACGAA ATTGACCACA GACTAGATAA CACGCCGCAT
GCTAAGTACT TCAAACAAGC CGCGTTAGGC GTCCCTCTTA GGATGGCTCT TATATACCTA
ATCCTTTCAC AACCATGA
 
Protein sequence
MWRGRDVITM RDFGRGELEE LFETAKYMEK YAKSRVDFLK GKIMAVAFFE PSTRTRLSFE 
TAMRRLGGDV IGFWGAEGTS VEKGETLADT IRMLDAYSNI IVIRHKLEGA AKLAAEVAES
PVINGGDGAF NHPTQAMLDL YTIWREFGHI DGLNIGLMGD LRYARTINSL LEALANFDVR
TFLISPEYLR PRAETLDYVK SRGLKLSFHT NVEEVIHELD VLYVVRVQRE RFLDPLEYER
VKGSYRVTLE ILKKAKKHLA ILHPLPRVDE IDHRLDNTPH AKYFKQAALG VPLRMALIYL
ILSQP