| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0021 |
|---|
| Symbol | |
|---|
| ID | 5055402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 14542 |
|---|
| End bp | 15327 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640467601 |
|---|
| Product | GTP-binding protein, HSR1-related |
|---|
| Protein accession | YP_001152290 |
|---|
| Protein GI | 145590288 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAATG TGAAAGAGAG TTGGCGCCTT GTGAGGAGAG TAATAGAAGA TGGAGACGTA
GTTCTGGAGG TTCTAGATGC CAGAGATCCT GTAGACACCA GACCTGAAGA GGTGGAGAAA
ATTGCGGAGA GACTTGGCAA ACGTCTTCTT GTAGTGCTGA ACAAGGCTGA CCTAGTCGAT
AGAGAGGTGT TAGAGAAGTG GAGAGAGTAC TTCCAGAAGT TAGGCATTCA CACGGTCTAT
GTAAGTGCTA AGTACAGACT TGGTACTAGG AGACTGTTTG TTGCCATAAG GGCGTTGGCC
CCTAGAATAC CGGCCACAGT GGTGGTGGTC GGATACCCCA ACGTGGGCAA GTCGACGATT
ATTAACTACT TAAAGGGGCG CTACGTGGCG CCCACGAGTC CTAAGCCAGG GTGGACTAGG
GGAGAGCAAC TTGTTAAGGC CAAGAGCTGG CTCTTTGTGC TCGATACTCC GGGAATTGTC
AAAACGCCGT CGACAGGAGA TTTGGCGCTT GACGTAATAA GGGGGTTAGT TGACCCAGCA
ACTGTAGACG ATCCTGTGCC TTATGCATAT GCTCTTCTAA AGCGCGTCTT GGCGTATAAT
CCGAGTGCGT TGAAAGAAGC CTACGGCATT GATTCCGACG TGGATAGCGC GTTAGAGGAG
ATAGGTAGGA CAAAACGAAA GCTATTGAAA GGCGGAAAGG TGAATATTGA TGCGGTTGCC
CGAATGGTGT TGAAAGACTG GACAGAGGGA AAGTTGAGAT ACATGCGCCT TCCACCAAAC
GTATAA
|
|---|
| Protein sequence | MCNVKESWRL VRRVIEDGDV VLEVLDARDP VDTRPEEVEK IAERLGKRLL VVLNKADLVD
REVLEKWREY FQKLGIHTVY VSAKYRLGTR RLFVAIRALA PRIPATVVVV GYPNVGKSTI
INYLKGRYVA PTSPKPGWTR GEQLVKAKSW LFVLDTPGIV KTPSTGDLAL DVIRGLVDPA
TVDDPVPYAY ALLKRVLAYN PSALKEAYGI DSDVDSALEE IGRTKRKLLK GGKVNIDAVA
RMVLKDWTEG KLRYMRLPPN V
|
|---|
| |