Gene Pars_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0015 
Symbol 
ID5055565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp11097 
End bp11885 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content50% 
IMG OID640467595 
Productband 7 protein 
Protein accessionYP_001152284 
Protein GI145590282 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTCC AAATAGAACA GATAGTCTTT GCCGCTTTGG TTTTCTTTGC GTTGATAATT 
CTTGTAGCCA TACTTTCTTC TGCTATTCGT ATCATCCCGG AGTATCAGAG AGCTGTTAAG
TTCAGGTTGG GCCGTGTTGT AGGAGTCGTA GGCCCTGGCT TGGTCTTCAT CATCCCAATA
ATTGAGACAA TAATGAGGTA TGACCTTAGA GTTGAGGTCG TCGACGTACC TGCGCAGCGC
GCATTAACTA AGGACAACGT GGAGGTGACC ATAGACGCGG CTATATATCT CCGTGTGATA
GACCCCCTAA AAACAGCCTT AACTGTGCGC AATCACGTCC CGGCTGTGGC TATATATGCT
GCGTCGACTC TACGCGATGT GGTAGGTATG GTAGATCTAG ACACACTCCT TACGCATAGG
GACGAGATTG CTAAGAGAAT TGCCTCAATA GTCGATGAGC ATGTCACGCC GTGGGGAGTG
AAGGTAAGCG CGGTGGCTAT AAAGGATATC AAACTACCCG ACGTGTTGCT CCGTGCCATG
GCGAGTCAAG CAGAGGCCGA GAGGGTGAGG CGGGCGAAGA TAACTTTGGC CTCTGCTGAG
TACGAGGCTA GCAAGATATA CCTAGAGGCT GCGGAGCGGT ATTCGCAAAA CCCGACGGCT
GTTCAGCTCA GGATGATAGA CGCGTTGATT GAAATAGCTC GGGAGCACAA CCTGATAATT
GTGACTCCGC CCACCCTGGA GTACGTCGCC CTCCCCTTAG CGATATCTAA AAGAGAGCAA
CAGAAGTAA
 
Protein sequence
MLLQIEQIVF AALVFFALII LVAILSSAIR IIPEYQRAVK FRLGRVVGVV GPGLVFIIPI 
IETIMRYDLR VEVVDVPAQR ALTKDNVEVT IDAAIYLRVI DPLKTALTVR NHVPAVAIYA
ASTLRDVVGM VDLDTLLTHR DEIAKRIASI VDEHVTPWGV KVSAVAIKDI KLPDVLLRAM
ASQAEAERVR RAKITLASAE YEASKIYLEA AERYSQNPTA VQLRMIDALI EIAREHNLII
VTPPTLEYVA LPLAISKREQ QK