Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0008 |
Symbol | |
ID | 5054500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 5541 |
End bp | 6596 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640467588 |
Product | translation initiation factor IF-2B subunit alpha |
Protein accession | YP_001152277 |
Protein GI | 145590275 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase [TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.679741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCTA TTGAATGGAG GGGCGACAAG CTGGTCCTCC TTGATCAGAG GATGCTACCA TTTGAGACAA GGTATGTAGA AGCTAGGACT GTAGAAGATG TCGCGGCAGC CATCCGCGAT ATGGTCGTAA GAGGGGCGCC CGCTATTGGC ATAACAGCCG CTTTCGGCAT GGTGATAGCG TTAAGCGAAA AACCTATTGA CAACATAGAC GATGCCCTAA AGACTTTGTC ATTGGCTAGA GACATCCTTT CTAAAACTAG GCCAACCGCC GTCAATCTAT TCTGGGCCCT TGATAGGATG CACAACAAGG CTCTTAGCCT AGCCTCGGCT ACGTCATCAG TTAGAGAACT TAGAGAGGGA CTAGAGGCGG AGGCTAAGAA AATATTCGAG GAAGAGCTAG AGGCGGAGAT TAGGATAGGT CTATACGGCG CGGAGCTACT AGAAGCTGGA GATACTGTTC TGACAATATG CAATGCCGGT GGTCTTGCCA CAGGCACGGG CTTAGGCACA GCAACCGCCC CAATTTACGT TGCTAAAATG TTGGGAAAAG ACATTTCGGT AATAGCACCT GAGACGAGAC CGTGGCAACA AGGCGCACGA CTCACAGTCT ACGAGCTTGT TAACAATGGC ATAAGGACTA CGTTAATAGC GGATACCGCC TTAGGACTTG TGATGTATAA GCGGATGGTT GACATAGTTA TGGTTGGCGC TGACCGTATT TTGCTCGACG GGCACGTTTT TAACAAAATA GGCACACTGA ACGAGGCCAT ACTCGCCCAC GAGTTCGGTA TACCTTTCTA TGTACTAGCA CCAACCAGCA CAATAGACCC AAAAAGTAGC GTAGACAGCG TAAAAATAGA AGAACGCGAC CCAGACGAGG TGCGCACGGT TAGAACAAGC CAGGGAAAAG TATATGTAAC ACTGAAGGAT ATCCAAGTCT ACAACCCCGT ATTCGACGTA ACTCCTCCTA AATACATAAC GGGAATAATT ACTGAAAAAG GAGTTGCGAC ACAACCTCTC TCGGTAAACC TAAGGAAACT GTTGAAAAAC ATATAG
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Protein sequence | MKPIEWRGDK LVLLDQRMLP FETRYVEART VEDVAAAIRD MVVRGAPAIG ITAAFGMVIA LSEKPIDNID DALKTLSLAR DILSKTRPTA VNLFWALDRM HNKALSLASA TSSVRELREG LEAEAKKIFE EELEAEIRIG LYGAELLEAG DTVLTICNAG GLATGTGLGT ATAPIYVAKM LGKDISVIAP ETRPWQQGAR LTVYELVNNG IRTTLIADTA LGLVMYKRMV DIVMVGADRI LLDGHVFNKI GTLNEAILAH EFGIPFYVLA PTSTIDPKSS VDSVKIEERD PDEVRTVRTS QGKVYVTLKD IQVYNPVFDV TPPKYITGII TEKGVATQPL SVNLRKLLKN I
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