Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0007 |
Symbol | |
ID | 5056037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 4874 |
End bp | 5527 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640467587 |
Product | hypothetical protein |
Protein accession | YP_001152276 |
Protein GI | 145590274 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4998] Predicted endonuclease (RecB family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGTGG GCGCCCGTTT CGAGAAACTA GTTATGGATC TACTCCCCGC CCTAGGCTTG GCACCAAAGA CGACACGCCT CAAAATTTTT AGAGAAGGCG TTGAGGTAGG GGAAGTTGAC ATAGTCGCCA TAGATGAAAA GGGAGATACC TACGCCATAG AGGTGAAGGC TGGGAAAGTT GATATCAGTG GCGTGAGGCA GGCTTATGTA AACGCCATGC TGATGGGAGC CAAACCGTTA GTCATAGCAA GGGGCTACGC AGACGAGGGG GCGCGGCAAC TCGCCAAAGA ACTTGGCGTA GAGGTAGTGC TATTGCCCGA CTACATATTC CTCTCACTAG ACGATCTATA CACTGCATTC GCGAGCGGAC TAGCCAGATT CTTCAAAGCA GTATTGTCAC TATATACAAA TCTATACCAA TATCTTGATT ACATCAAAGA ATGCCAAGAT ATGGAATGTA TTTGTAAAAA AATAAGTTGT AAGGAATTAT TTAAAAAACT ACCAAAAGAA GCACGTAATA TTGAAATGAT ATCACTAGTC CTAGAGCTAC ACAACGCAAT GCCAATGATA TGTGAAGAGG TCGACCAGTG TATCAGATTT TTAAAATCTA CAAATAAGCC TTGTGGATCC CAGAGTAGAG AAAATACGCC GTGA
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Protein sequence | MGVGARFEKL VMDLLPALGL APKTTRLKIF REGVEVGEVD IVAIDEKGDT YAIEVKAGKV DISGVRQAYV NAMLMGAKPL VIARGYADEG ARQLAKELGV EVVLLPDYIF LSLDDLYTAF ASGLARFFKA VLSLYTNLYQ YLDYIKECQD MECICKKISC KELFKKLPKE ARNIEMISLV LELHNAMPMI CEEVDQCIRF LKSTNKPCGS QSRENTP
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