Gene Pars_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0007 
Symbol 
ID5056037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp4874 
End bp5527 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content44% 
IMG OID640467587 
Producthypothetical protein 
Protein accessionYP_001152276 
Protein GI145590274 
COG category[L] Replication, recombination and repair 
COG ID[COG4998] Predicted endonuclease (RecB family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGTGG GCGCCCGTTT CGAGAAACTA GTTATGGATC TACTCCCCGC CCTAGGCTTG 
GCACCAAAGA CGACACGCCT CAAAATTTTT AGAGAAGGCG TTGAGGTAGG GGAAGTTGAC
ATAGTCGCCA TAGATGAAAA GGGAGATACC TACGCCATAG AGGTGAAGGC TGGGAAAGTT
GATATCAGTG GCGTGAGGCA GGCTTATGTA AACGCCATGC TGATGGGAGC CAAACCGTTA
GTCATAGCAA GGGGCTACGC AGACGAGGGG GCGCGGCAAC TCGCCAAAGA ACTTGGCGTA
GAGGTAGTGC TATTGCCCGA CTACATATTC CTCTCACTAG ACGATCTATA CACTGCATTC
GCGAGCGGAC TAGCCAGATT CTTCAAAGCA GTATTGTCAC TATATACAAA TCTATACCAA
TATCTTGATT ACATCAAAGA ATGCCAAGAT ATGGAATGTA TTTGTAAAAA AATAAGTTGT
AAGGAATTAT TTAAAAAACT ACCAAAAGAA GCACGTAATA TTGAAATGAT ATCACTAGTC
CTAGAGCTAC ACAACGCAAT GCCAATGATA TGTGAAGAGG TCGACCAGTG TATCAGATTT
TTAAAATCTA CAAATAAGCC TTGTGGATCC CAGAGTAGAG AAAATACGCC GTGA
 
Protein sequence
MGVGARFEKL VMDLLPALGL APKTTRLKIF REGVEVGEVD IVAIDEKGDT YAIEVKAGKV 
DISGVRQAYV NAMLMGAKPL VIARGYADEG ARQLAKELGV EVVLLPDYIF LSLDDLYTAF
ASGLARFFKA VLSLYTNLYQ YLDYIKECQD MECICKKISC KELFKKLPKE ARNIEMISLV
LELHNAMPMI CEEVDQCIRF LKSTNKPCGS QSRENTP