Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_29541 |
Symbol | RPS8 |
ID | 5006798 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009374 |
Strand | + |
Start bp | 416111 |
End bp | 417125 |
Gene Length | 1015 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 60% |
IMG OID | 640422219 |
Product | Ribosomal protein S8, component of cytosolic 80S ribosome and 40S small subunit |
Protein accession | XP_001422585 |
Protein GI | 145356743 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2007] Ribosomal protein S8E |
TIGRFAM ID | [TIGR00307] ribosomal protein S8.e |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00746212 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGGTGCGT TCGCGACGAC GCGACGACGC GAACGAAACC GCTCGCGCGC CTCGCGCTCG AACGCGACGT CGACGCGACG TCGACGCGAC GCGAAGGACG AAGGACTGAC GACGACGACG GCGACCCGAC GACAGGCATC TCTCGAGACA GCTTGCACAA GCGTCGCGCG ACCGGTGGGA AGCAGAAACC GTGGAGAAAG AAGAGAAAGT GAGTATTAAT GCGCGATCGA TCGCGCGACG CGCGACGGCG ACTCGAGGGG CGCAAGGGTG GGAAACGCGA GGTTTCGATG GGCGTCGCGT AGGTTAGGGC TTTCGCGGGC TGCGGCGACG ATGGGGTTTC GATGCGCGAC GCGCGGGAGG GGCGATGGCG CAGCGATGAC GCAGGAAACG ATGACTGACA TTATGTGCGT TCGCTTCTGT CGCGCGTAGA TACGAGCTCG GCCGTCAACC GGCGAACACG AAGCTCTCTT CCAACGTCAC GGTGCGCCAA GTGCGCTGCC GCGGTGGCAA CATCAAGCAC CGGGCGTTGC GATTGGATAC CGGTAACTTT GCGTGGGGCT CCGAGAACTG CACGCGTAAG ACGCGTATCT TGGACGTCGT GTACAACGCG TCTAATAACG AACTCGTTCG TACGAAGACG CTCGTGAAGA GCGCGGTCAT CGCCGTCGAC GCGGCGCCGT TTCGCGCGTG GTACGCCCAG CACTACGGCA AGAAGATTGG TATCAAGGTT AAGAATGGTG CTAAGGTTGA GAGTGAAGAC ATTGAAGAGA AGCGATCTAA GTCTGTGACG ATGAAGCTCC GCTCCCGTAA CCAAAAGCAC GAAGTTGCCA AAGCGATTGA CGAGCAGTTT GCCACGGGTC GTCTGTTGGC CATCATCACG TCTCGCCCTG GTCAGTGCGG TCGTGCGGAC GGCTACGTCT TGGAGGGTAA GGAGCTTGAG TTCTACCAGA AGAAGATGAT GAAGAAGAAG CACGCTGCGG CGGCTGCGGC CGCCGCGAAG GACGCCACCC ACTAA
|
Protein sequence | MGISRDSLHK RRATGGKQKP WRKKRKYELG RQPANTKLSS NVTVRQVRCR GGNIKHRALR LDTGNFAWGS ENCTRKTRIL DVVYNASNNE LVRTKTLVKS AVIAVDAAPF RAWYAQHYGK KIGIKVKNGA KVESEDIEEK RSKSVTMKLR SRNQKHEVAK AIDEQFATGR LLAIITSRPG QCGRADGYVL EGKELEFYQK KMMKKKHAAA AAAAAKDATH
|
| |