| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_7050 |
|---|
| Symbol | |
|---|
| ID | 5006486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009373 |
|---|
| Strand | - |
|---|
| Start bp | 72741 |
|---|
| End bp | 73391 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640421907 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422429 |
|---|
| Protein GI | 145356419 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 0.000378621 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.000000494703 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | CACAGGGACA CGCCCGAGGA CAACGCCTCG CTGCCGTGGT CGTTCGACGA GGCGACCAAA
CCGAGGGTGG ATGAAATCTT GGCGCGGTAT CCGACGAATT ACAAACGAAG CGCGATGATC
CCGCTGCTCG ATCTCGCGCA GCGCCAGAAC GCGGGACACC TGTCGCTGTC GCTGATGAAT
CACGTCGCGG AGATCTGCGA GGTGGCGCCG ATACGCGTGT ACGAGGTGGC GACGTTTTAT
TCCATGTTTA ATCGACAAAA GATGGGCAAG CTGCACGTGA TGGTGTGCGG GACGACGCCG
TGCATGCTGC GAGGCGCGCG AGACATCGAG CGCGCGCTGA GCGAATACAT GGGGGTAGAG
AAGTTTGAGA CGACCAAGGA TGGGATGTTC ACGCTCGGGG AGATGGAGTG CATGGGGTGC
TGCGTGAACG CGCCGATGAT CGCCGTGGCG GATTACAGAG CGGGCGTCGA GGGGTACTCG
TACAATTATT ACGAAGACTT GACCCCGCAA TCCGCCGTGC GCGTGTGCGA AGAGTTAAAG
GCTGGGAAAT CGCCGCGCGT CGGGTCGCAA ACGCGCGATA AGGCGGAACC GCTCCCCGGG
CAGACGACGC TCTTGGAGCC GCCGCCCGGG CCGCAGTGTC GCGACCTGAA C
|
|---|
| Protein sequence | HRDTPEDNAS LPWSFDEATK PRVDEILARY PTNYKRSAMI PLLDLAQRQN AGHLSLSLMN
HVAEICEVAP IRVYEVATFY SMFNRQKMGK LHVMVCGTTP CMLRGARDIE RALSEYMGVE
KFETTKDGMF TLGEMECMGC CVNAPMIAVA DYRAGVEGYS YNYYEDLTPQ SAVRVCEELK
AGKSPRVGSQ TRDKAEPLPG QTTLLEPPPG PQCRDLN
|
|---|
| |