Gene OSTLU_42287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42287 
Symbol 
ID5006467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009373 
Strand
Start bp2329 
End bp3204 
Gene Length876 bp 
Protein Length291 aa 
Translation table 
GC content61% 
IMG OID640421888 
Productpredicted protein 
Protein accessionXP_001422358 
Protein GI145356274 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones88 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGA CGATCGCGCG CACCGCGCGG TCGATCACCG CGCGCACCGC GCGATCGTTG 
CTCACGCCGG CGCCGTCGAC GTCGGCGCCG TTCGAACGCG GCGCCGCGCT CGCGAATCGT
CTTCACCGTC ACGGCCTCGA CCATCAACGA CGCTTCGCTT CGTCGTCGCC GCGCGCACGC
GTGGACGCGA ACAAAGGACC GGTGGGGTGG ACGTCTCTGG CGTTGGTGTC GCTCACGGGC
GCGACGTGTT TGTACTTTTA CGACCGCGAG AGGCAGCGAC GCGTCGACGG AGTCCGCGCG
GCGAAGACGC AGAGCAACGG GTTCCAGACC AACGTCGCCG GCGGTAAGGC GAGCGTGGGA
GGCGCGTTTC GATTGACGGA TTCGCGCACG GGTAAGGCGT TCACCGACAA AGACTTACTC
GGGAAGTGGG CGATGCTGTA TTTCGGGTTC ACGCACTGCC CCGATATTTG TCCCGACGAA
CTCGAAAAAG TAGCCGAGGT GACGACGTCC ATCAACTCGA CGCTCGAGAA GAAACACGAC
GGGACGGCGG CGCGTTTAGT GCCGGTGTTC ATATCGATCG ATCCGTCGCG AGACACGGCG
AAGCGCGTGA AGGAGTACGT GAAAGAGTTT CACGCCGACA TGATTGGGTT GACGGGGAGC
GAGAAACAGT GCGAAGACGC GGCTCGGAAA TACCGCGTGT ATTATCGTAA AACGGGCGAC
GAAGCCGCGA AGGATGATTA CTTGGTCGAT CACTCCATCA TCACGTACTT GTTGAATCCC
GAAGGCGAGT TCGTCACCTT TTACGGCAAG AACACGACGG AGAAGGAGGT CATCGCGAGC
GTGCGCGGCC ACATCGAGGC GTACGAAAAT CAATAA
 
Protein sequence
MSSTIARTAR SITARTARSL LTPAPSTSAP FERGAALANR LHRHGLDHQR RFASSSPRAR 
VDANKGPVGW TSLALVSLTG ATCLYFYDRE RQRRVDGVRA AKTQSNGFQT NVAGGKASVG
GAFRLTDSRT GKAFTDKDLL GKWAMLYFGF THCPDICPDE LEKVAEVTTS INSTLEKKHD
GTAARLVPVF ISIDPSRDTA KRVKEYVKEF HADMIGLTGS EKQCEDAARK YRVYYRKTGD
EAAKDDYLVD HSIITYLLNP EGEFVTFYGK NTTEKEVIAS VRGHIEAYEN Q