Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_42287 |
Symbol | |
ID | 5006467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009373 |
Strand | + |
Start bp | 2329 |
End bp | 3204 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | |
GC content | 61% |
IMG OID | 640421888 |
Product | predicted protein |
Protein accession | XP_001422358 |
Protein GI | 145356274 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 88 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGA CGATCGCGCG CACCGCGCGG TCGATCACCG CGCGCACCGC GCGATCGTTG CTCACGCCGG CGCCGTCGAC GTCGGCGCCG TTCGAACGCG GCGCCGCGCT CGCGAATCGT CTTCACCGTC ACGGCCTCGA CCATCAACGA CGCTTCGCTT CGTCGTCGCC GCGCGCACGC GTGGACGCGA ACAAAGGACC GGTGGGGTGG ACGTCTCTGG CGTTGGTGTC GCTCACGGGC GCGACGTGTT TGTACTTTTA CGACCGCGAG AGGCAGCGAC GCGTCGACGG AGTCCGCGCG GCGAAGACGC AGAGCAACGG GTTCCAGACC AACGTCGCCG GCGGTAAGGC GAGCGTGGGA GGCGCGTTTC GATTGACGGA TTCGCGCACG GGTAAGGCGT TCACCGACAA AGACTTACTC GGGAAGTGGG CGATGCTGTA TTTCGGGTTC ACGCACTGCC CCGATATTTG TCCCGACGAA CTCGAAAAAG TAGCCGAGGT GACGACGTCC ATCAACTCGA CGCTCGAGAA GAAACACGAC GGGACGGCGG CGCGTTTAGT GCCGGTGTTC ATATCGATCG ATCCGTCGCG AGACACGGCG AAGCGCGTGA AGGAGTACGT GAAAGAGTTT CACGCCGACA TGATTGGGTT GACGGGGAGC GAGAAACAGT GCGAAGACGC GGCTCGGAAA TACCGCGTGT ATTATCGTAA AACGGGCGAC GAAGCCGCGA AGGATGATTA CTTGGTCGAT CACTCCATCA TCACGTACTT GTTGAATCCC GAAGGCGAGT TCGTCACCTT TTACGGCAAG AACACGACGG AGAAGGAGGT CATCGCGAGC GTGCGCGGCC ACATCGAGGC GTACGAAAAT CAATAA
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Protein sequence | MSSTIARTAR SITARTARSL LTPAPSTSAP FERGAALANR LHRHGLDHQR RFASSSPRAR VDANKGPVGW TSLALVSLTG ATCLYFYDRE RQRRVDGVRA AKTQSNGFQT NVAGGKASVG GAFRLTDSRT GKAFTDKDLL GKWAMLYFGF THCPDICPDE LEKVAEVTTS INSTLEKKHD GTAARLVPVF ISIDPSRDTA KRVKEYVKEF HADMIGLTGS EKQCEDAARK YRVYYRKTGD EAAKDDYLVD HSIITYLLNP EGEFVTFYGK NTTEKEVIAS VRGHIEAYEN Q
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