| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28570 |
|---|
| Symbol | |
|---|
| ID | 5006447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009373 |
|---|
| Strand | + |
|---|
| Start bp | 94754 |
|---|
| End bp | 95355 |
|---|
| Gene Length | 602 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | 640421868 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422389 |
|---|
| Protein GI | 145356337 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5201] SCF ubiquitin ligase, SKP1 component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 0.10598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000000140146 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA CGATCACGCT CCGCTCGTCC GACGACGAGA CCTTCGAGGT CGACGAGGAC
GTCGCTTTGT GCGTGCCCGC GCGTGTCGCG ACGCGCGAAT CGCGACGCGC GAATCGCGAC
GAAGGAATCG CGTCGAACGA TTCGAAACCT CGACGACCGA CGACCGACGA CCGAGGACTG
ACGAGACGCG ACGACGACGC GCGCGCGACG ACAGCCTGTC GGAGACGATT AAATCCATCA
TCGAGGACAC GGAGAACGAC GCGCCGGTGC CGCTGCCGAA CGTGAACTCG AAGATTTTGA
CCAAGGTGAT CGAGTACTGC AAGTATCACG TCAAGGCGAA GAAGGAGAAC GAATCCGAGG
CGAACGTGAA GGCGTTCAAC AACGATTTCG TCAAGGTGGA CCAGGCGACG CTGTTTGAAA
TCATTCTGGC GGCGAATTAC TTGAACATGA AGGGGCTGCT GGACTTGACG TGCATGACGG
TGGCGAACAT GATGAAGGGG AAGACGCCGG AGGAGATTCG TAAGACGTTT AACATCAAGA
ATGATTTCAC GCCCGAGGAG GAAGAGGAGG TTAGGAAGGA AAATCAATGG GCGTTCGATT
AA
|
|---|
| Protein sequence | MAATITLRSS DDETFEVDED VAFLSETIKS IIEDTENDAP VPLPNVNSKI LTKVIEYCKY
HVKAKKENES EANVKAFNND FVKVDQATLF EIILAANYLN MKGLLDLTCM TVANMMKGKT
PEEIRKTFNI KNDFTPEEEE EVRKENQWAF D
|
|---|
| |