Gene OSTLU_28388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28388 
Symbol 
ID5006323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp323955 
End bp325229 
Gene Length1275 bp 
Protein Length389 aa 
Translation table 
GC content65% 
IMG OID640421744 
Productpredicted protein 
Protein accessionXP_001422159 
Protein GI145355847 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0426806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGCGCCGCGC GCCGCGAGCG ACGCGCCGGC GCTGCCGTGC GCCGCGCGCG ACGCGCGGTC 
GTCGCGAAGG CGGACGATGT CGCGAAAGTG GGACCGATTC GCGTCGCGCG GCGACCCGAC
GCCGCTGTGG GTGGCGGACA TGGATTTCAG CGCCCCGCGC GCGGTCGTCG ACGCGGTGAC
GGCGATCGCG CGCGCGGGGC ACTACGGGTA CGCCGATCCG GACGATGCGG TGACGGAGGC
GGCGACGGCG CGGTTTCGGG AGCGGCACGG CGTCGCGGAC GCGAACGCGA ACGCCCTGCG
ATGGCTTCCG GGACTGAATC CGGGACTCAA TCACGCCGTG CGCGCGGCGC GTCGCGCGCG
GGGGGGACGA GCGGTCGTCA CGGCGGTGTG CACGCCGATT TATCCACCGT TTTTGCACGC
GTCGAGGAAC GACGAAAGCG CGAGAGTCGA GGTGGCGCTG AGGCGAGCGA TCGAAGACGG
ACGCGCGCGG TACTCGATCG ATTGGGAAGC GCTCGAAACC GCGCTGGCGA GAGAAGACGT
CGGGTTGCTG CTGTGGTGCA ATCCGCACAA CCCGGTGGGA CGGGTGTGGA CGAGGGACGA
GATGGTTCGC GTCGCGAGGC TGTGCGTAAA GCACGACGTC GTTTTGTGCT CGGATGAAGT
GTGGCGGGAG TTGATTTTGG ACGAAAAGGC GACGCCATTT TGCGGCGCGG GCTCGATTTT
GGACGAAGTC GACGGTTTGC GCGAGCGATT GATCATCATG ACGTCGCCTT CGAAGACGTA
CAACGTCGCG GGGTGCGACG TCGCGATGGC GTACATCGCC GATAAAGCTC TGCGGCTGCA
CTTCGCGCGC GCTGGCTCGG ATAAAGCCGA AATCACGCCT TTTGGCTACG CCGCGACGCT
GGCGGCTTAC ACAGATCCCT CGTGCGAAGA GTGGCGGCAG CGCCTTTTGA CGTACTTGCG
AGCGAATCGC GACCACATCG ACGCCGCGCT CTCAGACGAC GCCAACGCGC GTGAGCTCAT
GACTTGGACA GTACCTGACG CGTCGTATTT GATGTGGCTC AACTGTGAAA AACTCGTCGA
TCGCGTCGAG CGATCGCCGT TCGAGCATTT CATCGAACAC GGCGTGGCGT TGAGCGACGG
CGCTCCGTTC TCGGCGCCGC TCAGCGCGCG CATCAACTTC GCCACGAGGC GCGATATCTT
AGATCAAGGT CTCGACAGCA TCGTGACCGC ACTCGAGCGG GCGTAATATC GAACTGAATC
GAATTGAATT GTAAC
 
Protein sequence
MSRKWDRFAS RGDPTPLWVA DMDFSAPRAV VDAVTAIARA GHYGYADPDD AVTEAATARF 
RERHGVADAN ANALRWLPGL NPGLNHAVRA ARRARGGRAV VTAVCTPIYP PFLHASRNDE
SARVEVALRR AIEDGRARYS IDWEALETAL AREDVGLLLW CNPHNPVGRV WTRDEMVRVA
RLCVKHDVVL CSDEVWRELI LDEKATPFCG AGSILDEVDG LRERLIIMTS PSKTYNVAGC
DVAMAYIADK ALRLHFARAG SDKAEITPFG YAATLAAYTD PSCEEWRQRL LTYLRANRDH
IDAALSDDAN ARELMTWTVP DASYLMWLNC EKLVDRVERS PFEHFIEHGV ALSDGAPFSA
PLSARINFAT RRDILDQGLD SIVTALERA