| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_28227 |
|---|
| Symbol | |
|---|
| ID | 5006241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | - |
|---|
| Start bp | 27792 |
|---|
| End bp | 29511 |
|---|
| Gene Length | 1720 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640421662 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422184 |
|---|
| Protein GI | 145355900 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase
[COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0120159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGGTGGAG CACGCGCGAG CGATTTCGAT GCGGACGCAC GCGCGCGCCG TCGCCGCGGT
GAAGGTGACG ACGACGACGA CGACGAGAGC ATCGCACGCG CGCGCGAATC GATGCCGACG
ATCGACGATC GACGCGCGCG CGCGACGCGC GAGGACGACG ACGACGACGA CGACGACGCG
GGCGAGCGCG CAAGAGCAAG ATGCCACCGA GGACGCCCCG GACGTGGAGA ACTGCGTCAT
CATCGGGTCT GGACCGGCTG GATACACCGC CGCGATCTAC GCGGGACGCG CGAACTTACG
TCCATTGATG TTTGAGGGGT TTCAAGCCGG AGGCGTGCCG GGAGGACAAC TCATGACGAC
GACAGAGGTG GAAAACTTTC CAGGTTTCCC CGAAGGCGTG ACGGGGCCCG ACTTGATGGA
CAAGATGCGC AAACAAGCGG AGCGATGGGG GGCTGTGATG CACACGGAGG ACGTGGTGAC
GGTAGATTTT ACTTCTCGCC CGTTCACGGT GTCGTCGTCC GATCGAACGG TGAAGGCGAA
TAGCGTGATC GTCGCCACGG GGGCGACGGC GAAACGACTC GGAATTCCCG CCGAGGCGAC
GCTGTGGAGC CGAGGGATCA GCGCATGCGC GATTTGCGAT GGGGCGAGCC CGATTTTTAA
GGGCGAAGAA GTCGCGGTGG TCGGAGGAGG TGACACCGCC ACGGAAGAAG CGGTGTACTT
GACAAAGTAC GCCAAGCACG TGCACTTACT CGTGCGCGGG TCGACGATGC GCGCCAGCAA
GGCTATGCAG GATAGGGTGC TTCAACACAA GGCAATCACC GTACATTACA ACACGGAATG
CGTGGACGGA TCGCCGAACA GCAAGGGAAA CTTGGGGGCG CTCAAGCTTC GCGACACGAA
TAACGGAGAT GAGCGTCAGC TCAAGGTGAA GGGGTTGTTT TACGGCATCG GACACACGCC
GAACAGCAAA ATTTTTGGCA ACCAAATCGA ACTTGACGAA GCGGGGTACG TCGTCGTGCG
AGAGGGTACC AGGACGTCCA TTGAGGGTGT GTTCTCGGCC GGTGATCTTC ACGATCAAGA
GTTCCGGCAA GCCATCACGG CTGCGGGATC CGGATGCATG GCTGCCATCT CCGTCGAGCG
TTACTTGACG GAGAAGAACC TCCTCGTTGA GCACCACCAA ACGAAGCAGC GCAAGAGCGT
CGAACGAGAG GAGTCTGTTT CGGAAGAAGA GCGAGCGATC CAGGGAGAGG ATGAAGACTC
ATTCGATATC AATGTCACGA AGCACTACGG TCAGTATGCC CTCAGAAAGC TTTACCATGA
GTCAGACCGC GTGGTCATGG TCATGTACTC GGCGCCCACT TGCGGCCCAT GTCGACGCTT
GAAGCCGATG TTGGACAAGG TCATCGCGGA GTACGGAGAC AAGGTGCACT ATGTTGAGAT
AGATATCGCT GCTGATCCTG AAATTGCGGA AGCCGCGGGT GTGACTGGGA CGCCTATGAC
GCAAATTTTC TACCAAAAAG AGCGCATAGA AGTCTTGAGC GGTGTGAAAA TGAAGAGCGA
GTACCGTCGC GTCATCGACG GCGCCTTGGG CGCGAGTGCG ACGAAGGAGG TGACCATGCC
TGCGGCGCAA GCGGGTGAAA AGAAGGAGAG CCCAGTGGAG ACCAGTAGAT AATTCGTTTA
CTCATCATTT ACTCACCATT TCGTTAACTA CTTACAGTTG
|
|---|
| Protein sequence | MRTHARAVAA VKVTTTTTTR ASHARANRCR RSTIDARARR ARTTTTTTTT RASAQEQDAT
EDAPDVENCV IIGSGPAGYT AAIYAGRANL RPLMFEGFQA GGVPGGQLMT TTEVENFPGF
PEGVTGPDLM DKMRKQAERW GAVMHTEDVV TVDFTSRPFT VSSSDRTVKA NSVIVATGAT
AKRLGIPAEA TLWSRGISAC AICDGASPIF KGEEVAVVGG GDTATEEAVY LTKYAKHVHL
LVRGSTMRAS KAMQDRVLQH KAITVHYNTE CVDGSPNSKG NLGALKLRDT NNGDERQLKV
KGLFYGIGHT PNSKIFGNQI ELDEAGYVVV REGTRTSIEG VFSAGDLHDQ EFRQAITAAG
SGCMAAISVE RYLTEKNLLV EHHQTKQRKS VEREESVSEE ERAIQGEDED SFDINVTKHY
GQYALRKLYH ESDRVVMVMY SAPTCGPCRR LKPMLDKVIA EYGDKVHYVE IDIAADPEIA
EAAGVTGTPM TQIFYQKERI EVLSGVKMKS EYRRVIDGAL GASATKEVTM PAAQAGEKKE
SPVETSR
|
|---|
| |