Gene OSTLU_28221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_28221 
Symbol 
ID5006136 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp21230 
End bp22233 
Gene Length1004 bp 
Protein Length296 aa 
Translation table 
GC content55% 
IMG OID640421557 
Productpredicted protein 
Protein accessionXP_001422180 
Protein GI145355891 
COG category[S] Function unknown 
COG ID[COG5134] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0015286 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAACCT TAGCTGCGGT GCAGGCTGAT GGGTTCTATT ACCCTCCTGT ACGTATCCTC 
GCGCGATTCC GCGCAAGAGA GACCGCGAAG CGCGTCAATC GACGCTCGAT TCCAGCGCCG
TCGTCTCGAC ACTGACCGCG GCGCGTCGTA TTCACTCGCA GGATTGGACG CCCGAGGGTG
GGGCGAAGAA CAGCGCGTAT AAGGGCTCAA ATGGTTCGCT CGGCAAGCGC GCGAACAAAC
TGTCTCAGGG TGTGCTGACG ATTCGTTTTG AGATGCCCTT CAACGTCAAG TGCGGGGCGT
GCGGACACAT GATTGCGAAG GGTGTGCGGT TCAACGCAGA GAAGAGGAAG ATTGGGAAGT
ATCATTCGAC GCCTATATGG AGCTTTACAA TGCACTCGGC GTGTTGTTCG CAGGAGATCG
AAGTTCAGAC GGATCCTGCA AAGACGGAGT ACAATGTGAC CAAGGGCGCG GAGCGATGCG
TGGGCTACGG CGGAGCGATG GACGACGAAG AGTCGCCTGA GGATGCGATG CAAATGCTGG
AATATCAAAA CGAAGAAGAA CGCGCGAAGT TTTTAGCGAA TCCTATAGCG GTATTAGAAC
GAGGCGTGGA GGACGAGAAA CGAGCGAGAG CGAGAGCAAG GACAACTTTT GAGCTCAACG
CGTTGAGCAA GGCGCGGTGG AAGGAAGACT ACGACGTCAA CAAATCTTTA CGTCGAAGCA
TGCGAGGGCG GCGTAAAGAA GAGCACGCGT TGAGAGATCA CGCCCGCGCG CTTGGTTTAC
CCGAGCACGT CAAGTTAGAA CCCGAGCGAG ACGAGGACAA GGAGTATGCC CGCAGAGTGT
TCAACGCGTC GGTTTTCGAA CGCAATCGGA AACAGAAAAG AAAGGATATT CTTTCGGAGT
CCATTTTTGC GGATAAGCGA ACGAGGCCGA AACCAGCTGC AAAACGCACG AGTTCGGCGT
CTTCTAATCA CTCAAGAGCG GCGAAATTAG CGAAGAGACG TTGA
 
Protein sequence
MSTLAAVQAD GFYYPPDWTP EGGAKNSAYK GSNGSLGKRA NKLSQGVLTI RFEMPFNVKC 
GACGHMIAKG VRFNAEKRKI GKYHSTPIWS FTMHSACCSQ EIEVQTDPAK TEYNVTKGAE
RCVGYGGAMD DEESPEDAMQ MLEYQNEEER AKFLANPIAV LERGVEDEKR ARARARTTFE
LNALSKARWK EDYDVNKSLR RSMRGRRKEE HALRDHARAL GLPEHVKLEP ERDEDKEYAR
RVFNASVFER NRKQKRKDIL SESIFADKRT RPKPAAKRTS SASSNHSRAA KLAKRR