| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_25730 |
|---|
| Symbol | |
|---|
| ID | 5006290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009371 |
|---|
| Strand | - |
|---|
| Start bp | 213791 |
|---|
| End bp | 217813 |
|---|
| Gene Length | 4023 bp |
|---|
| Protein Length | 1340 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640421711 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422233 |
|---|
| Protein GI | 145356005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.431405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0866432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGC GCGACGTCGC GGCGTACATC GAACGCCAAC GCGCGCGGCG CGCGCCGTGC
GTGGTCGTGC TCACGCCCGA CGACGATGCG CGCGCGCGCG AAAGTTTGAG CGCGGCGCTG
GATGTCCCCA GACTCGTCGA CGTTTTGCGC CCGTTTCGCG TCGTCGACGA CCTGAACGTC
GTCGTGCGCG CGGACGCGGA GAACCCGCAG CGAGCGCTGA GCGTGCGGGC GCTAGAGGTG
CGGTTTAAGA GCGATTCGGG GGCGACGTCG GCGACGCGGG ACGACGCGGA AGCGCGCGGC
CGGGACGCCG TCGCGAGCGA ATGCTTCGAT GTTTCGACCA TGACCGACGA TACGTGCGGA
CGGGCGCGAC GAGAGACGGG TGATGCGTGC GTGCGACGAG CGAGAACGGA GGCGGAGACG
AGCGGGAGGT TTGAGAAATT CTTTGACGCG AACGAGCGGG CGACGGCGTT TAACGAGTGC
GAGGCGTTTG ATCACGCGCT CGGAGCGATT CTTTGCGTGC GCGCGGGAAA ATCTTCGTAC
GAGGACGTGC TACAATCATT CGAGGACTTA AAACAGCAGT TTTTGCGACT GCCGGTGTTC
GCCACGGGTG GAGCGGATCC AGAGACGTGT TTCGGGAAGG TGCTCGTGTG GGACGCGAGA
GATGGAGCGA CGACAAAGGA AGAAGCGGAG GCTTTGTTGC AGCGCGTGCG TCAGACAGGG
GCCTGGGACT GCGAACTATT GACACTGAAT TCCGATCTCG AAGGCACGTG CGCGTCTGGG
GTCGATTGGA ACGAGCATAG GGAAACGGTT ATTTCCCGCG CCGCGGCTGA GCGCGCGGGC
GTGGCGAACG AGGCGAGTAA AACCATGGGG CGTTACATGA GCTTGGAAGA CGTCGATCGG
GCAAAAACGT ACGTGCGAGT GTTCGTAACG AAAACCTTAC TTCCACACAT GGAGCGAAAG
CTCTTCGCGC TATCGACACA GATTTACAAC ACGAGAAAAG GTTTAAGAAA TCAATTCAAG
ACCTTTTGGG GACGAAGCAC GGCGACGGCG ACGGCACATC GAGATGGCGA ACAAGGCCAT
CGATCGCCCG AGGGACAAAT TCGGCTCGCC GGAGATTTAG CGTTCATGCT CGGCGATTAC
GACACTGCGT TGGCGAATTT CAAGCTCGTA CATTCGGATT ACAAATCGCA AAGTGCGTGG
AAGCGATTGG CGAGTTCGTA CGAAGCCATG GCGCACGTGT ACGTAGCGAC TCGTCATTTG
CGCAATAAGG CGGATTTGAA AAAAGACATC AACCACGCAT ATGACAGCGC GATGACGAGT
CTGTTGAAGT ACGAAACGAT CGGTGGGGTT GGTGATTTGC ATCTAGCGCA CGTCGAGATG
TTGAAGGCGC GTTCGGCGGT GGAACATGCC AAGGCGCTGA CAGCCATCGG TGCGTATCGG
GAAGCGCACG CGCCACTTGT TTCGGCGTCT GCATTTGTAC ACTCCGATCT GCGAGCGGCA
CTCTTGCTTG AGCGCGCCGC GTTCGCGTTC GTCCGCTGTC ACCCTCCTAT GGTGCGCAAA
TTCGCGTCGT ACATGATTTT AGCCGGCGCG AGGTACGTGC GTGCGGGCGC TATAGCGGCT
GCGACTCGAT GCTACTCCTT CGCTCTGCCG GTGTCGAACG AGTATGGCTG GAGTGCGGCA
TTAGAGCACT TGAACACCAC CCTCGGTCGT CTCGTGGCGA ACATCGGACA CACGAAAGCG
GCGCTGGAGT TTTTCAGAGA CGCGGTGGGG TGTGCGGCAT ATTTACCGGC CGACGCACAA
ACCGTTCGTA TCGATGCGCT CGAAGAATTC GCTGCGAAAT ACGCGAGTGA AGTGCCCGCG
GAGCAGCGCA ACGCGAAAGA CGACGAGCTG GCGTGTCCCT TGCCCGAAAT GAACGTCCAA
AAAGTCAAAG TGATATTTGC GGACGATCGT GAGTCGAGCG AATCGACTTC TGATCACGGT
GAAGAAGCGT GGAGCGCCAT TGAACGGGGT GGAGTTATCC CACAGAACTT GCTTGCGGCC
GCACCGGGAG CGAATTGGCT GAGTGGTGGT CCTCGCACGA TTGAGATCGA GCAAACAGCA
GTGTGCGCCT CCGGCGAAGA CGTGAAAATA GACGTCGATT TGAAGAATCC ACTCCGCTTG
CCTTTGGACG TGAATAATCT GCGTTTGCTG TGGGAGTTTA CGCCATCGAA TGGGACGTTA
GTATCAAACG ACCGCGGCGA GACTTCGGAC GCACTCGTGC GAGCAAAGGT GGAGAATAAA
GTTTTCGCGC CGCAGTCAGA GCAAACGATT CGGCTCACCA TCACGCCGAG CGCTTCGGGT
GTCTTACGCG TGTCAGGCGT GGCGTGGACC GTGGGGTCGA AACGGGTGCT ACACGGCCGT
CGATACTTCG ATGTCAGTGC GCCTCGAACG CGTCGTGGGG CAAACGGCGA GTGGTTACGC
GACGTCACAA AGCACAAACG GTTGGTGTTT AACGTTTGCG AGACGGTGCC AAGATGTGAT
GGCACGCTCG AAGGCGTCCC CAAGCGCTCA ATGGATGGCG CTCTGCAGAG AATAGACTTA
GTCATCTCCA ACGTCACGCA ACCGATGGCA AAATGGATCC GGGTGCGTTT GCCGAGATCC
GTTCTCCGTC CAGTTGACGC GTCTCACGTG CCCGTGACCG AACCGACCGT GAAGCGTAAT
TCGAGTCGAG AGGATCTCGA AAGAGACTCG ATAAATCGCG GTGATGGTGA CGGTGGGGAC
GATGACGTCG TAGATAGCGA TGGTGTGATC TACGCGCTGC CTGCTTGGGA GACGCTCGAG
TCTGGGTCAA CGATTCGCTG GCCACTGTGG TTTCATCCAA ACGCCGTCGG TCGCACCGCT
GTGCGCATCT GCGTGTGCTA TCAGCCCGAA CCTCCAGCGC CAAAGTTATT GCGCTATCGT
ACGATTCGTA TCTTTGAAAG CGTGGAGGTC ACACCTTCCA TGCGCGTGAG CGCGATGACG
ATACCGTCGC CTTCGCATCC GTTGGCGCGA GTCATTCGAT TGTCCATTGC GAGTGGGCGA
GAGCAAACGG ATATCTTCAA ACTCGGAAGC GTGCGGCTTG GATCGAGCAA AGATCGCGTG
AAGTACGAAC TGATACCTCT CATGAAGCAC GCCACGGCAC CGCGATTGAT TGCTCCCGGG
GAGACGATCG AGACGCTCAT AAAATGTTCG CCGAGCGAGG AGGCAAACGC GAAGGAACTG
CTCAACTTTG TGGACGCCAT CCCGGAAGAA AGCGCGAAAC CCTTGTTTGC GTTTCACAAT
TCATTCAAAA AGAACGATGC AAAACGTGCG TTGAAAGTGC GCAACGAAGC GATCACGGAT
GGTTTGATGA TAACATGGTC GTTGAAGGGT GGAGATGTCG TCGGCGCGCA GCACGTACGC
AACGTCGTCG AGCTCACGCG GTGCACGGAT ACTACCCGCA CACCCAACGA GCTGAAAAGC
AAGGTGACCT GGACAATCAA TTATGCTAGC ACGATTAAGC TCGACGAGAC GGCGCCAGGT
AACATGACGT ACTCATCCGT CACCTTGAGC GCTCGGAACG AATCCGACGA CGCGCTCGAC
ATTGTCTTTG TCGCCGACGC GACGTCATCG GCGCCCGCCA ACGTTGAAAG CGGCGGCTGG
TCTCTGGAAA TCGATAAGAA CGCGTGGCAA AACCGAGAAA CGCTACCCAC AAGCGAGGAC
AAGCGCCGAC GGCCGATTCC CCTGCCGCCT GGCAAACCTA TTGTGTGGGT TGGCCCAGTG
CGCCGCGTCG CCAAAAACGT CGCCCCTGGC GCGGTTTTCA ATTTCCCCCT CACCATCGCG
TGTTTCGCCA AAGGCGATCA CATTTTAGAT GGTTACACGC TGAGCTGGAC CGAAACTGCG
CCCGCGCCCT CCGCGACGCC GGGATCGATG TCCATATCCT CGGTCTCGCG AGCCACCGAC
GGCGCTCGCG TCGCCGTTCC GACGGATGCC CGCAACGCGC CATTCATCAT CACCGTCACG
TAG
|
|---|
| Protein sequence | MDPRDVAAYI ERQRARRAPC VVVLTPDDDA RARESLSAAL DVPRLVDVLR PFRVVDDLNV
VVRADAENPQ RALSVRALEV RFKSDSGATS ATRDDAEARG RDAVASECFD VSTMTDDTCG
RARRETGDAC VRRARTEAET SGRFEKFFDA NERATAFNEC EAFDHALGAI LCVRAGKSSY
EDVLQSFEDL KQQFLRLPVF ATGGADPETC FGKVLVWDAR DGATTKEEAE ALLQRVRQTG
AWDCELLTLN SDLEGTCASG VDWNEHRETV ISRAAAERAG VANEASKTMG RYMSLEDVDR
AKTYVRVFVT KTLLPHMERK LFALSTQIYN TRKGLRNQFK TFWGRSTATA TAHRDGEQGH
RSPEGQIRLA GDLAFMLGDY DTALANFKLV HSDYKSQSAW KRLASSYEAM AHVYVATRHL
RNKADLKKDI NHAYDSAMTS LLKYETIGGV GDLHLAHVEM LKARSAVEHA KALTAIGAYR
EAHAPLVSAS AFVHSDLRAA LLLERAAFAF VRCHPPMVRK FASYMILAGA RYVRAGAIAA
ATRCYSFALP VSNEYGWSAA LEHLNTTLGR LVANIGHTKA ALEFFRDAVG CAAYLPADAQ
TVRIDALEEF AAKYASEVPA EQRNAKDDEL ACPLPEMNVQ KVKVIFADDR ESSESTSDHG
EEAWSAIERG GVIPQNLLAA APGANWLSGG PRTIEIEQTA VCASGEDVKI DVDLKNPLRL
PLDVNNLRLL WEFTPSNGTL VSNDRGETSD ALVRAKVENK VFAPQSEQTI RLTITPSASG
VLRVSGVAWT VGSKRVLHGR RYFDVSAPRT RRGANGEWLR DVTKHKRLVF NVCETVPRCD
GTLEGVPKRS MDGALQRIDL VISNVTQPMA KWIRVRLPRS VLRPVDASHV PVTEPTVKRN
SSREDLERDS INRGDGDGGD DDVVDSDGVI YALPAWETLE SGSTIRWPLW FHPNAVGRTA
VRICVCYQPE PPAPKLLRYR TIRIFESVEV TPSMRVSAMT IPSPSHPLAR VIRLSIASGR
EQTDIFKLGS VRLGSSKDRV KYELIPLMKH ATAPRLIAPG ETIETLIKCS PSEEANAKEL
LNFVDAIPEE SAKPLFAFHN SFKKNDAKRA LKVRNEAITD GLMITWSLKG GDVVGAQHVR
NVVELTRCTD TTRTPNELKS KVTWTINYAS TIKLDETAPG NMTYSSVTLS ARNESDDALD
IVFVADATSS APANVESGGW SLEIDKNAWQ NRETLPTSED KRRRPIPLPP GKPIVWVGPV
RRVAKNVAPG AVFNFPLTIA CFAKGDHILD GYTLSWTETA PAPSATPGSM SISSVSRATD
GARVAVPTDA RNAPFIITVT
|
|---|
| |