Gene OSTLU_18734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_18734 
SymbolTPR4 
ID5006205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp274384 
End bp276267 
Gene Length1884 bp 
Protein Length627 aa 
Translation table 
GC content62% 
IMG OID640421626 
ProductTPR-repeat containing protein 
Protein accessionXP_001422147 
Protein GI145355821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.164578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGGT TCGCGCGCGA GCGCGCGATC GAGATGGACG AAGATCTGCG TCGACGCGTC 
GTCGAGGATC CGGCGTTCGC GCTCGCGATG CCGCTCGAGG ACGTCGCGCG CGTCGAATCG
GCCGCGGCCG AGCGCGAAGG TCAATTGTCG CTCGCGAACG GCGAGTGCGC GTACGCGGCG
GCGTTCTACG GGCTGGCGCT GCGCGCGCTG GCGCTCGATC GCGCGCGCGC GCCGATGGAC
GCGAGCGCGC GACGAAGGAA ACGGATCGAG CTGCGGTTGA GGCTCGGGGA CGCGCGCGCG
GGGGCGAACG AGCCGGGACG CGCGTGCGGC GCGTACGCGG CGGCGCTGCG AGGGCTCGGG
TTGATCGCGA AGAAGCGCGC GACGCGCGAG GGCGAAGAGA ATGAACCCGA GGGTGTGCTC
GGGCGAGAGC GAAGGGACGG CGAGGAGTGC GAGGAGACGT ACGATGACGG GGGGGACGAG
GAGACGTTTG CGAAGGAGAA GCCGCGAATC GCGGCGGCGT TCTTGCGCAA GGCGAACGAG
AGCTCGAGTA AGGCGTCGAT CAAGGGATTG GTGGACGGAG AGGTGATGTT TCGCATCGGT
CGCGCGTGTC AAATGGCGGG GAGGTATAAT CGCGCGTTGT TGGCGTACGA GACGGCGCTC
GTATTGCAAC CCGACGGGCC GCGAGACGCG AGCGCGACGC AGGTGTACTT GGCGTGCGGA
GAGATGTATT TGAGCTTGCA GATGGCGGAT TACGCGCTGG AATGTTTTAG AAAAGTCATG
AAACGACCGA TGGAGGCATC GCTCGGGACT GGGGATGTTT TGTGCGAAAT CGCGTCGTGT
TATAGAGTAT TACGCTTGCC CGAGGAGGAG TCTCGGTGCA TGAAGTCGGT GTGTTCCGAT
CCTTTGCACA AGCCGATTCG TACCACGAAC GTCATCAGGG TGGCGTGGTA CCGGTACGAG
CGAGATAAAG ACGCCGCGCG AGCGCTTCGC GAGCTCACTG AAGCGAATGT GGTGAAGAAA
ACGTCCGAAG GCTTGTACAC GAAGGGGCGC GTGCACGCCG AGACGGGGAA TTTCGACGCC
GCGGACGCGT GCTACGTCGA GGCGTGCAAG ATGGAACCCA CGAGCCCGAA GATTTGGCTC
GAGATTGGAA ATCTGTATTT GAATGGATTC CAGATCCCCA CCATAGCGGT CAAGGCGTAC
GGGCGCGCGA AAGAACTGGC GACGTTCATG CAACTGCAGG AGGACGCGTT GCACGCCGCG
CGCGGGTACG GGTGCGTGTC CGAGGGACAG ACGAAATTCG CCGACAGTTC CGAGGTGACG
GCGACGCACG AAAACGCCGT CATCGGCCGT GGCGATGCAT TCACCGAGTT AGGCCAAGTG
AGCTCGGCGC TTCGTGAATA CGAACAAGTT CCCGAAACCG GTCGCGTGCA AATTCGAAAG
ATGAAAATTA TGATTTGGGC CGTCGTCGCC TTGCAACGCG CCTACCGAAG GCACAAGGCG
CGTATGAACG CCGAAATTGC GAGTGGCATT CGTCGACCCG CGTTACTTCC AGCGGCGCGA
CCGCAGGAGG CGAGACCAAA GATATCTGAA GCGTTGCTTG CCAAACGCGC AAACCGACCA
AAGACAGAGG TCAAGCCGGC GAAGAACAAA TACGAGACGA TCACTCGCCA AATCACTCGC
ACAGCGACGC CGCGCGATCG CGCGCCGATG GACATGCTGA AAGATTTCAC CATCAAACCG
GCGAAGAATT ACGTCAGCCC GAACGCGTCG CCCGCGACAA AGCGGAAGAC GAAAGGCGTC
GGTCTCTTCG ACTTTTCTCG CGCCGAGCAA AAGACCCCCA TCGCGACGGC GCCGTCCAGC
GGACGCACAT CCCTCTTCAA ATGA
 
Protein sequence
MPWFARERAI EMDEDLRRRV VEDPAFALAM PLEDVARVES AAAEREGQLS LANGECAYAA 
AFYGLALRAL ALDRARAPMD ASARRRKRIE LRLRLGDARA GANEPGRACG AYAAALRGLG
LIAKKRATRE GEENEPEGVL GRERRDGEEC EETYDDGGDE ETFAKEKPRI AAAFLRKANE
SSSKASIKGL VDGEVMFRIG RACQMAGRYN RALLAYETAL VLQPDGPRDA SATQVYLACG
EMYLSLQMAD YALECFRKVM KRPMEASLGT GDVLCEIASC YRVLRLPEEE SRCMKSVCSD
PLHKPIRTTN VIRVAWYRYE RDKDAARALR ELTEANVVKK TSEGLYTKGR VHAETGNFDA
ADACYVEACK MEPTSPKIWL EIGNLYLNGF QIPTIAVKAY GRAKELATFM QLQEDALHAA
RGYGCVSEGQ TKFADSSEVT ATHENAVIGR GDAFTELGQV SSALREYEQV PETGRVQIRK
MKIMIWAVVA LQRAYRRHKA RMNAEIASGI RRPALLPAAR PQEARPKISE ALLAKRANRP
KTEVKPAKNK YETITRQITR TATPRDRAPM DMLKDFTIKP AKNYVSPNAS PATKRKTKGV
GLFDFSRAEQ KTPIATAPSS GRTSLFK