Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_18734 |
Symbol | TPR4 |
ID | 5006205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009371 |
Strand | + |
Start bp | 274384 |
End bp | 276267 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | |
GC content | 62% |
IMG OID | 640421626 |
Product | TPR-repeat containing protein |
Protein accession | XP_001422147 |
Protein GI | 145355821 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.164578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTGGT TCGCGCGCGA GCGCGCGATC GAGATGGACG AAGATCTGCG TCGACGCGTC GTCGAGGATC CGGCGTTCGC GCTCGCGATG CCGCTCGAGG ACGTCGCGCG CGTCGAATCG GCCGCGGCCG AGCGCGAAGG TCAATTGTCG CTCGCGAACG GCGAGTGCGC GTACGCGGCG GCGTTCTACG GGCTGGCGCT GCGCGCGCTG GCGCTCGATC GCGCGCGCGC GCCGATGGAC GCGAGCGCGC GACGAAGGAA ACGGATCGAG CTGCGGTTGA GGCTCGGGGA CGCGCGCGCG GGGGCGAACG AGCCGGGACG CGCGTGCGGC GCGTACGCGG CGGCGCTGCG AGGGCTCGGG TTGATCGCGA AGAAGCGCGC GACGCGCGAG GGCGAAGAGA ATGAACCCGA GGGTGTGCTC GGGCGAGAGC GAAGGGACGG CGAGGAGTGC GAGGAGACGT ACGATGACGG GGGGGACGAG GAGACGTTTG CGAAGGAGAA GCCGCGAATC GCGGCGGCGT TCTTGCGCAA GGCGAACGAG AGCTCGAGTA AGGCGTCGAT CAAGGGATTG GTGGACGGAG AGGTGATGTT TCGCATCGGT CGCGCGTGTC AAATGGCGGG GAGGTATAAT CGCGCGTTGT TGGCGTACGA GACGGCGCTC GTATTGCAAC CCGACGGGCC GCGAGACGCG AGCGCGACGC AGGTGTACTT GGCGTGCGGA GAGATGTATT TGAGCTTGCA GATGGCGGAT TACGCGCTGG AATGTTTTAG AAAAGTCATG AAACGACCGA TGGAGGCATC GCTCGGGACT GGGGATGTTT TGTGCGAAAT CGCGTCGTGT TATAGAGTAT TACGCTTGCC CGAGGAGGAG TCTCGGTGCA TGAAGTCGGT GTGTTCCGAT CCTTTGCACA AGCCGATTCG TACCACGAAC GTCATCAGGG TGGCGTGGTA CCGGTACGAG CGAGATAAAG ACGCCGCGCG AGCGCTTCGC GAGCTCACTG AAGCGAATGT GGTGAAGAAA ACGTCCGAAG GCTTGTACAC GAAGGGGCGC GTGCACGCCG AGACGGGGAA TTTCGACGCC GCGGACGCGT GCTACGTCGA GGCGTGCAAG ATGGAACCCA CGAGCCCGAA GATTTGGCTC GAGATTGGAA ATCTGTATTT GAATGGATTC CAGATCCCCA CCATAGCGGT CAAGGCGTAC GGGCGCGCGA AAGAACTGGC GACGTTCATG CAACTGCAGG AGGACGCGTT GCACGCCGCG CGCGGGTACG GGTGCGTGTC CGAGGGACAG ACGAAATTCG CCGACAGTTC CGAGGTGACG GCGACGCACG AAAACGCCGT CATCGGCCGT GGCGATGCAT TCACCGAGTT AGGCCAAGTG AGCTCGGCGC TTCGTGAATA CGAACAAGTT CCCGAAACCG GTCGCGTGCA AATTCGAAAG ATGAAAATTA TGATTTGGGC CGTCGTCGCC TTGCAACGCG CCTACCGAAG GCACAAGGCG CGTATGAACG CCGAAATTGC GAGTGGCATT CGTCGACCCG CGTTACTTCC AGCGGCGCGA CCGCAGGAGG CGAGACCAAA GATATCTGAA GCGTTGCTTG CCAAACGCGC AAACCGACCA AAGACAGAGG TCAAGCCGGC GAAGAACAAA TACGAGACGA TCACTCGCCA AATCACTCGC ACAGCGACGC CGCGCGATCG CGCGCCGATG GACATGCTGA AAGATTTCAC CATCAAACCG GCGAAGAATT ACGTCAGCCC GAACGCGTCG CCCGCGACAA AGCGGAAGAC GAAAGGCGTC GGTCTCTTCG ACTTTTCTCG CGCCGAGCAA AAGACCCCCA TCGCGACGGC GCCGTCCAGC GGACGCACAT CCCTCTTCAA ATGA
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Protein sequence | MPWFARERAI EMDEDLRRRV VEDPAFALAM PLEDVARVES AAAEREGQLS LANGECAYAA AFYGLALRAL ALDRARAPMD ASARRRKRIE LRLRLGDARA GANEPGRACG AYAAALRGLG LIAKKRATRE GEENEPEGVL GRERRDGEEC EETYDDGGDE ETFAKEKPRI AAAFLRKANE SSSKASIKGL VDGEVMFRIG RACQMAGRYN RALLAYETAL VLQPDGPRDA SATQVYLACG EMYLSLQMAD YALECFRKVM KRPMEASLGT GDVLCEIASC YRVLRLPEEE SRCMKSVCSD PLHKPIRTTN VIRVAWYRYE RDKDAARALR ELTEANVVKK TSEGLYTKGR VHAETGNFDA ADACYVEACK MEPTSPKIWL EIGNLYLNGF QIPTIAVKAY GRAKELATFM QLQEDALHAA RGYGCVSEGQ TKFADSSEVT ATHENAVIGR GDAFTELGQV SSALREYEQV PETGRVQIRK MKIMIWAVVA LQRAYRRHKA RMNAEIASGI RRPALLPAAR PQEARPKISE ALLAKRANRP KTEVKPAKNK YETITRQITR TATPRDRAPM DMLKDFTIKP AKNYVSPNAS PATKRKTKGV GLFDFSRAEQ KTPIATAPSS GRTSLFK
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