| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_47740 |
|---|
| Symbol | |
|---|
| ID | 5005963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | - |
|---|
| Start bp | 416940 |
|---|
| End bp | 418318 |
|---|
| Gene Length | 1379 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640421384 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422065 |
|---|
| Protein GI | 145355638 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase
[COG0572] Uridine kinase |
|---|
| TIGRFAM ID | [TIGR00235] uridine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0678521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GGTAATCGCG AACCGTTTCT GATCGGCGTC GCCGGTGGGA CGGCGAGTGG GAAGACGACG
GTGTGTGATC TCATCATGCA AAACTTGCAA GAGCAACGCG TGGTGTTGAT AGCGCAGGAT
TCGTTTTATC GCCCGCTCAC GGCGTACGAG CACGAAAATG TGGGGGCGTA TAATTTCGAT
CACCCAGATG CGATCGACAC GAAGTACTTG GTGGAAGTGC TGCAAAAGTT GATGCTTCGA
CAGTCGGTGG ACATTCCGGT GTACGACTTC GTGACGCACT CGCGAAGCGA CGAAAAGATT
CACATCGAGA GCGGCGATGT GATCATCATC GAGGGCATTC TAGTGTTGGC GATGGAAGAG
ATTCGAGCGA TGTGCCACAT GAAAGTGTTC GTGGACACGG ACGATGATTT GAGATTGGCG
AGGCGGTTGA AGCGAGACAC CGTGGATAGA GGACGAAGCG TCGATGGCGT CATCACACAA
TACACGACGT TCGTGAAGCC GATGTTCGAC ACCTTTGTGT CGCCGAGCAA GAAATATGCC
GATGTCATCA TTCCGTGGGC GCAAGGAGAG AACACGGTGG CCATCGATCT CATCGTCCAG
CACATTCGAA CAAAGCTCGG CCAAAATGAT TTGCGGCGCA TTTATCGCAA CTTGGTGGTT
TTGCCGCCGC AGTTCCAAAT CAGAGGCATG CACACCATCA TACGCGATCG CCGGGTAAAT
AGAAGCGATT TCGTCTTTTA CAGCGACCGC ATCATTCGTC TCGTCGTCGA ACATGGGTTG
GGACACTTGC CGTTTAGCGA GCAAGTCGTC CTCACGCCGA CGGGCGACCA GTACAAGGGC
GTCACGTTTT GCAGCAAGCT TTGCGGGGTT TCCATCATTC GATCGGGAGA GGCTATGGAG
AATGCTTTGC GCGCGTGTTG CAAAGGGATC AAAATTGGGA AATTGCTCAT CGAGCGTCGC
GACAAGGATG GGATGATAGC GCGCCAAGCG AGCGCCTCGG GTGACTTGTC TTCTCCGGTG
ATGTACAACT CGCGAATCCA TTACGAAAAA CTTCCGCACG ACATCGCCGA TCGCTATGTG
CTGTTGCTGG ACCCTATTTT AGCCACGGGC GTGAGCGCAC AATCGGCGAT CGATTTGCTC
CTCGAGCGCG GCGTGCAAGA GGAGAAAATT CTCTTCCTCA CCGTCATCGC GTCCACTCAA
GGCGTGCACC ACCTGTGCAC GAGATACCCG CGCATGAAGG TCATCACGTC AGAGGTCGAT
GCAGGATTGA GCGATGATAA CAAGGTTCTT CCTGGCGTCG GTGAGTTCGG CGACAGGTAC
TTTGGCACCG AAATGCCGAG CATCGTGCAG CTCCAACCGC CCTCCGACTC TCGCATGTT
|
|---|
| Protein sequence | MQNLQEQRVV LIAQDSFYRP LTAYEHENVG AYNFDHPDAI DTKYLVEVLQ KLMLRQSVDI
PVYDFVTHSR SDEKIHIESG DVIIIEGILV LAMEEIRAMC HMKVFVDTDD DLRLARRLKR
DTVDRGRSVD GVITQYTTFV KPMFDTFVSP SKKYADVIIP WAQGENTVAI DLIVQHIRTK
LGQNDLRRIY RNLVVLPPQF QIRGMHTIIR DRRVNRSDFV FYSDRIIRLV VEHGLGHLPF
SEQVVLTPTG DQYKGVTFCS KLCGVSIIRS GEAMENALRA CCKGIKIGKL LIERRDKDGM
IARQASASGD LSSPVMYNSR IHYEKLPHDI ADRYVLLLDP ILATGVSAQS AIDLLLERGV
QEEKILFLTV IASTQGVHHL CTRYPRMKVI TSEVDAGLSD DNKVLPGVGE FGDRYFGTEM
PSIVQLQPPS DSRM
|
|---|
| |